RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 SYNJ2BP-COX16A0A087WUM0 186 aa20.9■□□□□ 0.94
TRIO-223ENST00000515710 NDC80O14777 642 aa20.9■□□□□ 0.94
TRIO-223ENST00000515710 BAIAP3O94812 1187 aa20.9■□□□□ 0.94
TRIO-223ENST00000515710 PECAM1P16284 738 aaPredicted RBP20.9■□□□□ 0.94
TRIO-223ENST00000515710 ADRA1BP35368 520 aa20.9■□□□□ 0.94
TRIO-223ENST00000515710 ARL13BQ3SXY8 428 aa20.9■□□□□ 0.94
TRIO-223ENST00000515710 BTBD8Q5XKL5 378 aa20.9■□□□□ 0.94
TRIO-223ENST00000515710 RNF168Q8IYW5 571 aaPredicted RBP20.9■□□□□ 0.94
TRIO-223ENST00000515710 EDEM1Q92611 657 aa20.9■□□□□ 0.94
TRIO-223ENST00000515710 PGLYRP2Q96PD5 576 aa20.9■□□□□ 0.94
TRIO-223ENST00000515710 WDR6Q9NNW5 1121 aaKnown RBP20.9■□□□□ 0.94
TRIO-223ENST00000515710 DDIT4Q9NX09 232 aa20.9■□□□□ 0.94
TRIO-223ENST00000515710 COX16Q9P0S2 106 aa20.9■□□□□ 0.94
TRIO-223ENST00000515710 SCML2Q9UQR0 700 aa20.9■□□□□ 0.94
TRIO-223ENST00000515710 VWA8A3KMH1 1905 aa20.89■□□□□ 0.94
TRIO-223ENST00000515710 LTBP2Q14767 1821 aa20.89■□□□□ 0.94
TRIO-223ENST00000515710 PATJQ8NI35 1801 aa20.89■□□□□ 0.94
TRIO-223ENST00000515710 MTMR11A4FU01 709 aa20.89■□□□□ 0.93
TRIO-223ENST00000515710 GOLGA6BA6NDN3 693 aa20.89■□□□□ 0.93
TRIO-223ENST00000515710 SGK1O00141 431 aa20.89■□□□□ 0.93
TRIO-223ENST00000515710 STIP1P31948 543 aaKnown RBP20.89■□□□□ 0.93
TRIO-223ENST00000515710 ARPP19P56211 112 aa20.89■□□□□ 0.93
TRIO-223ENST00000515710 WDR5P61964 334 aaKnown RBP20.89■□□□□ 0.93
TRIO-223ENST00000515710 SCAPQ12770 1279 aa20.89■□□□□ 0.93
TRIO-223ENST00000515710 SPOUT1Q5T280 376 aaKnown RBP20.89■□□□□ 0.93
TRIO-223ENST00000515710 CFAP58Q5T655 872 aa20.89■□□□□ 0.93
TRIO-223ENST00000515710 KCNT2Q6UVM3 1135 aa20.89■□□□□ 0.93
TRIO-223ENST00000515710 TMC3Q7Z5M5 1100 aa20.89■□□□□ 0.93
TRIO-223ENST00000515710 CMTR2Q8IYT2 770 aaKnown RBP20.89■□□□□ 0.93
TRIO-223ENST00000515710 ARHGAP18Q8N392 663 aa20.89■□□□□ 0.93
TRIO-223ENST00000515710 CSPG4P5Q96PW8 444 aa20.89■□□□□ 0.93
TRIO-223ENST00000515710 TMEM121Q9BTD3 319 aa20.89■□□□□ 0.93
TRIO-223ENST00000515710 TSPYL1Q9H0U9 437 aa20.89■□□□□ 0.93
TRIO-223ENST00000515710 FAM204AQ9H8W3 233 aa20.89■□□□□ 0.93
TRIO-223ENST00000515710 PCDH9Q9HC56 1237 aa20.89■□□□□ 0.93
TRIO-223ENST00000515710 COMMD8Q9NX08 183 aa20.89■□□□□ 0.93
TRIO-223ENST00000515710 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.89■□□□□ 0.93
TRIO-223ENST00000515710 BACE2Q9Y5Z0 518 aa20.89■□□□□ 0.93
TRIO-223ENST00000515710 H3BRJ5 948 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 PPFIA2O75334 1257 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 RBP3P10745 1247 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 CXCR3P49682 368 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 DHX9Q08211 1270 aaKnown RBP20.88■□□□□ 0.93
TRIO-223ENST00000515710 DDR2Q16832 855 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 C1orf228Q6PIY5 440 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 RSPO2Q6UXX9 243 aaPredicted RBP20.88■□□□□ 0.93
TRIO-223ENST00000515710 ATAD1Q8NBU5 361 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 RSAD2Q8WXG1 361 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 ZNF558Q96NG5 402 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 TXLNGYQ9BZA5 131 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 RC3H2Q9HBD1 1191 aaKnown RBP20.88■□□□□ 0.93
TRIO-223ENST00000515710 IL37Q9NZH6 218 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 CWC15Q9P013 229 aaKnown RBP20.88■□□□□ 0.93
TRIO-223ENST00000515710 MTRRQ9UBK8 725 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 ANAPC5Q9UJX4 755 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 NR2C2P49116 596 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 DEFB103AP81534 67 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 HSP90B2PQ58FF3 399 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 RHBDF2Q6PJF5 856 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 NPNTQ6UXI9 565 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 MON1AQ86VX9 555 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 IQCKQ8N0W5 287 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 FBXO22Q8NEZ5 403 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 ADAM32Q8TC27 787 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 PIK3R5Q8WYR1 880 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 SPATA17Q96L03 361 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 WDCPQ9H6R7 721 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 IL23AQ9NPF7 189 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 MED4Q9NPJ6 270 aa20.88■□□□□ 0.93
TRIO-223ENST00000515710 RTN3O95197 1032 aaPredicted RBP20.87■□□□□ 0.93
TRIO-223ENST00000515710 HAPLN1P10915 354 aaPredicted RBP20.87■□□□□ 0.93
TRIO-223ENST00000515710 ZNF135P52742 658 aaPredicted RBP20.87■□□□□ 0.93
TRIO-223ENST00000515710 ITGA8P53708 1063 aa20.87■□□□□ 0.93
TRIO-223ENST00000515710 ROR1Q01973 937 aa20.87■□□□□ 0.93
TRIO-223ENST00000515710 IFRD2Q12894 506 aaPredicted RBP20.87■□□□□ 0.93
TRIO-223ENST00000515710 SLMAPQ14BN4 828 aa20.87■□□□□ 0.93
TRIO-223ENST00000515710 SLC8B1Q6J4K2 584 aa20.87■□□□□ 0.93
TRIO-223ENST00000515710 RNF19BQ6ZMZ0 732 aa20.87■□□□□ 0.93
TRIO-223ENST00000515710 SCD5Q86SK9 330 aa20.87■□□□□ 0.93
TRIO-223ENST00000515710 PYROXD2Q8N2H3 581 aa20.87■□□□□ 0.93
TRIO-223ENST00000515710 DQX1Q8TE96 717 aaKnown RBP20.87■□□□□ 0.93
TRIO-223ENST00000515710 MAGEB5Q9BZ81 275 aa20.87■□□□□ 0.93
TRIO-223ENST00000515710 DNALI1O14645 258 aaPredicted RBP20.86■□□□□ 0.93
TRIO-223ENST00000515710 IGLV3-25P01717 112 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 LAG3P18627 525 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 GPR15P49685 360 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 VPS41P49754 854 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 RPL10AP62906 217 aaKnown RBP20.86■□□□□ 0.93
TRIO-223ENST00000515710 BTG3Q14201 252 aaPredicted RBP20.86■□□□□ 0.93
TRIO-223ENST00000515710 IZUMO3Q5VZ72 239 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 DARS2Q6PI48 645 aaKnown RBP20.86■□□□□ 0.93
TRIO-223ENST00000515710 PRSS55Q6UWB4 352 aaPredicted RBP20.86■□□□□ 0.93
TRIO-223ENST00000515710 TAC4Q86UU9 113 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 SLC39A11Q8N1S5 342 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 RIN2Q8WYP3 895 aaPredicted RBP20.86■□□□□ 0.93
TRIO-223ENST00000515710 RUFY1Q96T51 708 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 COL4A6Q14031 1691 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 CFAP69A5D8W1 941 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 H7C0C1 242 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 AGPSO00116 658 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms