RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 O00370 1275 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 TRIM24O15164 1050 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 GDF9O60383 454 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 ADAM23O75077 832 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 AFPP02771 609 aaKnown RBP14.31□□□□□ -0.12
TCOF1-215ENST00000515516 LCP1P13796 627 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 HOXB2P14652 356 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 BMP6P22004 513 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 WASP42768 502 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 HARS2P49590 506 aaKnown RBP14.31□□□□□ -0.12
TCOF1-215ENST00000515516 KCNH2Q12809 1159 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 E2F5Q15329 346 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 CNGA2Q16280 664 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 PLA2G2CQ5R387 149 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 BSPRYQ5W0U4 402 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 LCLAT1Q6UWP7 414 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 RRAGAQ7L523 313 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 LPCAT2Q7L5N7 544 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 DENND1CQ8IV53 801 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 KCTD13Q8WZ19 329 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 PLD4Q96BZ4 506 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 CNGB3Q9NQW8 809 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 ABCC13Q9NSE7 274 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 PLK2Q9NYY3 685 aa14.31□□□□□ -0.12
TCOF1-215ENST00000515516 AGO1Q9UL18 857 aaKnown RBP14.31□□□□□ -0.12
TCOF1-215ENST00000515516 BCLAF3A2AJT9 711 aaKnown RBP14.3□□□□□ -0.12
TCOF1-215ENST00000515516 M0QYV0 167 aa14.3□□□□□ -0.12
TCOF1-215ENST00000515516 TULP2O00295 520 aa14.3□□□□□ -0.12
TCOF1-215ENST00000515516 KLKB1P03952 638 aa14.3□□□□□ -0.12
TCOF1-215ENST00000515516 HNRNPLP14866 589 aaKnown RBP eCLIP14.3□□□□□ -0.12
TCOF1-215ENST00000515516 DHPSP49366 369 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-215ENST00000515516 CAMK4Q16566 473 aa14.3□□□□□ -0.12
TCOF1-215ENST00000515516 EGFLAMQ63HQ2 1017 aa14.3□□□□□ -0.12
TCOF1-215ENST00000515516 PMS2CLQ68D20 193 aa14.3□□□□□ -0.12
TCOF1-215ENST00000515516 TOGARAM2Q6ZUX3 1019 aa14.3□□□□□ -0.12
TCOF1-215ENST00000515516 CYP2U1Q7Z449 544 aa14.3□□□□□ -0.12
TCOF1-215ENST00000515516 FMNL3Q8IVF7 1028 aa14.3□□□□□ -0.12
TCOF1-215ENST00000515516 TRIM59Q8IWR1 403 aa14.3□□□□□ -0.12
TCOF1-215ENST00000515516 UBR7Q8N806 425 aa14.3□□□□□ -0.12
TCOF1-215ENST00000515516 RBBP8NLQ8NC74 664 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-215ENST00000515516 OLIG1Q8TAK6 271 aa14.3□□□□□ -0.12
TCOF1-215ENST00000515516 DDI1Q8WTU0 396 aa14.3□□□□□ -0.12
TCOF1-215ENST00000515516 UCMAQ8WVF2 138 aa14.3□□□□□ -0.12
TCOF1-215ENST00000515516 RLN3Q8WXF3 142 aa14.3□□□□□ -0.12
TCOF1-215ENST00000515516 NDRG1Q92597 394 aaKnown RBP14.3□□□□□ -0.12
TCOF1-215ENST00000515516 CHMP5Q9NZZ3 219 aa14.3□□□□□ -0.12
TCOF1-215ENST00000515516 KIAA1468Q9P260 1216 aa14.3□□□□□ -0.12
TCOF1-215ENST00000515516 HBS1LQ9Y450 684 aaKnown RBP14.3□□□□□ -0.12
TCOF1-215ENST00000515516 SPTBN4Q9H254 2564 aa14.3□□□□□ -0.12
TCOF1-215ENST00000515516 HELZP42694 1942 aaKnown RBP14.29□□□□□ -0.12
TCOF1-215ENST00000515516 KHNYNO15037 678 aaKnown RBP14.29□□□□□ -0.12
TCOF1-215ENST00000515516 CISD3P0C7P0 127 aa14.29□□□□□ -0.12
TCOF1-215ENST00000515516 KRT5P13647 590 aa14.29□□□□□ -0.12
TCOF1-215ENST00000515516 BCKDHBP21953 392 aa14.29□□□□□ -0.12
TCOF1-215ENST00000515516 KCNA4P22459 653 aa14.29□□□□□ -0.12
TCOF1-215ENST00000515516 BRD2P25440 801 aaKnown RBP14.29□□□□□ -0.12
TCOF1-215ENST00000515516 P2RY2P41231 377 aa14.29□□□□□ -0.12
TCOF1-215ENST00000515516 RGS7P49802 495 aa14.29□□□□□ -0.12
TCOF1-215ENST00000515516 LIMK1P53667 647 aa14.29□□□□□ -0.12
TCOF1-215ENST00000515516 MARSP56192 900 aaKnown RBP14.29□□□□□ -0.12
TCOF1-215ENST00000515516 GCNT1Q02742 428 aa14.29□□□□□ -0.12
TCOF1-215ENST00000515516 SCML4Q8N228 414 aa14.29□□□□□ -0.12
TCOF1-215ENST00000515516 CPXM2Q8N436 756 aa14.29□□□□□ -0.12
TCOF1-215ENST00000515516 LMO3Q8TAP4 145 aa14.29□□□□□ -0.12
TCOF1-215ENST00000515516 TFAP2BQ92481 460 aa14.29□□□□□ -0.12
TCOF1-215ENST00000515516 EDEM1Q92611 657 aa14.29□□□□□ -0.12
TCOF1-215ENST00000515516 INTS2Q9H0H0 1204 aaKnown RBP14.29□□□□□ -0.12
TCOF1-215ENST00000515516 SMOC1Q9H4F8 434 aa14.29□□□□□ -0.12
TCOF1-215ENST00000515516 RWDD2AQ9UIY3 292 aa14.29□□□□□ -0.12
TCOF1-215ENST00000515516 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.29□□□□□ -0.12
TCOF1-215ENST00000515516 YJEFN3A6XGL0 299 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 PRRT4C9JH25 899 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 E7ENQ6 273 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 RNF225M0QZC1 329 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-215ENST00000515516 GFRA2O00451 464 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 NPC1O15118 1278 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 MED7O43513 233 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 ZNF217O75362 1048 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 FBXO21O94952 628 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 PENKP01210 267 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-215ENST00000515516 CHRM1P11229 460 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-215ENST00000515516 DPP6P42658 865 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 DAOAP59103 153 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 ZNF445P59923 1031 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 ARID5AQ03989 594 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 STARD3Q14849 445 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 TRIP4Q15650 581 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-215ENST00000515516 TPD52L1Q16890 204 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-215ENST00000515516 PKDCCQ504Y2 493 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 MPPE1Q53F39 396 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 SPDYCQ5MJ68 293 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 STPG1Q5TH74 334 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 FYB2Q5VWT5 728 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 RNF43Q68DV7 783 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 SLC36A4Q6YBV0 504 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 ENOSF1Q7L5Y1 443 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 ARHGEF19Q8IW93 802 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 IPO4Q8TEX9 1081 aaKnown RBP14.28□□□□□ -0.12
TCOF1-215ENST00000515516 SLC35F5Q8WV83 523 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 IRGQQ8WZA9 623 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms