RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 A0A088AWK7 358 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 CCDC160A6NGH7 325 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 H0YGN5 161 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 TK2O00142 265 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 ATG7O95352 703 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 SGPL1O95470 568 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 RARBP10826 455 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 TNFAIP3P21580 790 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 PTPN9P43378 593 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 CDK7P50613 346 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 BACE1P56817 501 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 TGFB2P61812 414 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 KRT71Q3SY84 523 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 XKR9Q5GH70 373 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 FAM102BQ5T8I3 360 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 B3GNT6Q6ZMB0 384 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 TAS1R3Q7RTX0 852 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 SYTL1Q8IYJ3 562 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 FAM71AQ8IYT1 594 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 TTLQ8NG68 377 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 EFHD2Q96C19 240 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 SAMD11Q96NU1 681 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 NTPCRQ9BSD7 190 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 CD93Q9NPY3 652 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 MRPL39Q9NYK5 338 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 NFS1Q9Y697 457 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 ANK1P16157 1881 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 ARHGAP10A1A4S6 786 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 KRIT1O00522 736 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 PTPRAP18433 802 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 RPS12P25398 132 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 GNL1P36915 607 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 GMPSP49915 693 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 BCAP31P51572 246 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 ADAM17P78536 824 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 AP1B1Q10567 949 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 GRM1Q13255 1194 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 PKN2Q16513 984 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 PHKG1Q16816 387 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 MAP3K21Q5TCX8 1036 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 ARHGEF16Q5VV41 709 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 FAM122CQ6P4D5 195 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 NSMFQ6X4W1 530 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 ZNF704Q6ZNC4 412 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 FAM47EQ6ZV65 393 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 CROCCP3Q8IVE0 287 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 SCYL3Q8IZE3 742 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 SHC3Q92529 594 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 GPRASP2Q96D09 838 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 RMDN1Q96DB5 314 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 ZNF333Q96JL9 665 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 POP1Q99575 1024 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 CELF4Q9BZC1 486 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 XPNPEP1Q9NQW7 623 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 TOPORSQ9NS56 1045 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 NMRK1Q9NWW6 199 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 E2F3O00716 465 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 FGGP02679 453 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 NR3C2P08235 984 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 CPA3P15088 417 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 POLR2CP19387 275 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 RPL9P32969 192 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 MARCKSL1P49006 195 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 FMO1Q01740 532 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 PFKPQ01813 784 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 GALNT1Q10472 559 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 TMEM132BQ14DG7 1078 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 C11orf63Q6NUN7 778 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 AADACL2Q6P093 401 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 USP37Q86T82 979 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 SLC47A2Q86VL8 602 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 ZDHHC14Q8IZN3 488 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 ELMOD1Q8N336 334 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 CCNYL1Q8N7R7 359 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 RDM1Q8NG50 284 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 ELMO3Q96BJ8 720 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 C12orf42Q96LP6 360 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 TSGA13Q96PP4 275 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 PHF12Q96QT6 1004 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 NIFKQ9BYG3 293 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 SLITRK6Q9H5Y7 841 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 RUBCNLQ9H714 662 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 GIN1Q9NXP7 522 aa7.73□□□□□ -1.17
PDLIM5-219ENST00000514743 SBF1O95248 1867 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 IQANK1A0A1B0GTG1 560 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 TMEM238LA0A1B0GVL6 79 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 SH3PXD2BA1X283 911 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 RTCAO00442 366 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 CASQ2O14958 399 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 FTLP02792 175 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 LYNP07948 512 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 TPBGLP0DKB5 382 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 ATF6P18850 670 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 HSD17B3P37058 310 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 KRT6CP48668 564 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 LRRC74AQ0VAA2 488 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 CSTF3Q12996 717 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 CCDC6Q16204 474 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 DALRD3Q5D0E6 543 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms