RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 NVLO15381 856 aaKnown RBP7.7□□□□□ -1.18
CLIP1-205ENST00000514271 KRT36O76013 467 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 ITGAVP06756 1048 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 BRAFP15056 766 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 PSMC2P35998 433 aaKnown RBP7.7□□□□□ -1.18
CLIP1-205ENST00000514271 SP4Q02446 784 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 CDC16Q13042 620 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 FASTKD3Q14CZ7 662 aaKnown RBP7.7□□□□□ -1.18
CLIP1-205ENST00000514271 RBBP5Q15291 538 aaKnown RBP7.7□□□□□ -1.18
CLIP1-205ENST00000514271 MTERF2Q49AM1 385 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 MSS51Q4VC12 460 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 RASIP1Q5U651 963 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 AP1ARQ63HQ0 302 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 ACAD10Q6JQN1 1059 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 C8orf82Q6P1X6 216 aaPredicted RBP7.7□□□□□ -1.18
CLIP1-205ENST00000514271 ELMSAN1Q6PJG2 1045 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 KBTBD6Q86V97 674 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 CCNJLQ8IV13 435 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 KIAA0319LQ8IZA0 1049 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 ARFGAP1Q8N6T3 406 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 SYNCQ9H7C4 482 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 RMI1Q9H9A7 625 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 SF3B1O75533 1304 aaKnown RBP eCLIP7.7□□□□□ -1.181e-10■■■■■ 241.2
CLIP1-205ENST00000514271 KIAA1671Q9BY89 1806 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 POM121CA8CG34 1229 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 STK25O00506 426 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 TBCAO75347 108 aaKnown RBP7.7□□□□□ -1.18
CLIP1-205ENST00000514271 ZWINTO95229 277 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 AMHP03971 560 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 CCDC166P0CW27 439 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 VARSP26640 1264 aaKnown RBP7.7□□□□□ -1.18
CLIP1-205ENST00000514271 ATP5DP30049 168 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 RAD23BP54727 409 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 GALNT2Q10471 571 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 DMP1Q13316 513 aaPredicted RBP7.7□□□□□ -1.18
CLIP1-205ENST00000514271 IKBKEQ14164 716 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 BTG3Q14201 252 aaPredicted RBP7.7□□□□□ -1.18
CLIP1-205ENST00000514271 HLTFQ14527 1009 aaKnown RBP eCLIP7.7□□□□□ -1.18
CLIP1-205ENST00000514271 UGCGQ16739 394 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 DCAF4L1Q3SXM0 396 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 FBXO47Q5MNV8 452 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 LRRC38Q5VT99 294 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 TMEM154Q6P9G4 183 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 LZTR1Q8N653 840 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 TMC2Q8TDI7 906 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 TMEM117Q9H0C3 514 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 CTTNBP2NLQ9P2B4 639 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 IP6K2Q9UHH9 426 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 BLOC1S6Q9UL45 172 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 WASF2Q9Y6W5 498 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 ZNF106Q9H2Y7 1883 aaKnown RBP7.7□□□□□ -1.18
CLIP1-205ENST00000514271 TRIP11Q15643 1979 aa7.7□□□□□ -1.18
CLIP1-205ENST00000514271 A0A1W2PPM1 405 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 TREHO43280 583 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 FGBP02675 491 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 THPOP40225 353 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 ALDH3B2P48448 385 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 SMAD3P84022 425 aaKnown RBP7.69□□□□□ -1.18
CLIP1-205ENST00000514271 LAMB3Q13751 1172 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 ITGA9Q13797 1035 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 TSNAXIP1Q2TAA8 658 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 CYS1Q717R9 158 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 PHF13Q86YI8 300 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-205ENST00000514271 SVIPQ8NHG7 77 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 PGBD4Q96DM1 585 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 DCBLD2Q96PD2 775 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 RANBP9Q96S59 729 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 ECSITQ9BQ95 431 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 ACSS3Q9H6R3 686 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 DDX56Q9NY93 547 aaKnown RBP7.69□□□□□ -1.18
CLIP1-205ENST00000514271 CDH7Q9ULB5 785 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 CDY2AQ9Y6F7 541 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 ATP2C2O75185 946 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 EOMESO95936 686 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 PIGRP01833 764 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 FTLP02792 175 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-205ENST00000514271 ADRB2P07550 413 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 PLS3P13797 630 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 DARSP14868 501 aaKnown RBP7.69□□□□□ -1.18
CLIP1-205ENST00000514271 ARRB2P32121 409 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 ATN1P54259 1190 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-205ENST00000514271 SIM2Q14190 667 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-205ENST00000514271 FAM109BQ6ICB4 259 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-205ENST00000514271 TRAF7Q6Q0C0 670 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 CEP128Q6ZU80 1094 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 TRIM50Q86XT4 487 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 CHCHD4Q8N4Q1 142 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 NUDCD1Q96RS6 583 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 TSC22D3Q99576 134 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 ADAMTS10Q9H324 1103 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 RASAL2Q9UJF2 1139 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 AKT3Q9Y243 479 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 KANSL1LA0AUZ9 987 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 CYP11B1P15538 503 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 EIF4BP23588 611 aaKnown RBP7.69□□□□□ -1.18
CLIP1-205ENST00000514271 GSTT1P30711 240 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 CLK1P49759 484 aaKnown RBP7.69□□□□□ -1.18
CLIP1-205ENST00000514271 CACNA2D1P54289 1103 aa7.69□□□□□ -1.18
CLIP1-205ENST00000514271 GEMIN4P57678 1058 aaKnown RBP7.69□□□□□ -1.18
CLIP1-205ENST00000514271 CTBSQ01459 385 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms