RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 TLR8Q9NR97 1041 aaKnown RBP11.55□□□□□ -0.56
DDX41-216ENST00000513562 KRT82Q9NSB4 513 aa11.55□□□□□ -0.56
DDX41-216ENST00000513562 PLK2Q9NYY3 685 aa11.55□□□□□ -0.56
DDX41-216ENST00000513562 FTSJ1Q9UET6 329 aa11.55□□□□□ -0.56
DDX41-216ENST00000513562 CEP192Q8TEP8 1941 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 CAPN8A6NHC0 703 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 H0Y8X5 98 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 EIF5BO60841 1220 aaKnown RBP11.54□□□□□ -0.56
DDX41-216ENST00000513562 C7P10643 843 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 PRKCHP24723 683 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 HNF1BP35680 557 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 ATP5C1P36542 298 aaKnown RBP11.54□□□□□ -0.56
DDX41-216ENST00000513562 CTSKP43235 329 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 CDH8P55286 799 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 SEMG2Q02383 582 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 CFHR1Q03591 330 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 ZNF234Q14588 700 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 RTP5Q14D33 572 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 FYB2Q5VWT5 728 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 KLHDC10Q6PID8 442 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 LAYNQ6UX15 382 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 USP49Q70CQ1 688 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 GPR155Q7Z3F1 870 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 FAM124AQ86V42 546 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 FUKQ8N0W3 1084 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 RBBP8NLQ8NC74 664 aaPredicted RBP11.54□□□□□ -0.56
DDX41-216ENST00000513562 ZMIZ2Q8NF64 920 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 UCMAQ8WVF2 138 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 BAP1Q92560 729 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 MED10Q9BTT4 135 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 NRSN2Q9GZP1 204 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 XYLT2Q9H1B5 865 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 FBXO44Q9H4M3 255 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 KIAA1586Q9HCI6 787 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 CSNK1G1Q9HCP0 422 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 OSER1Q9NX31 292 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 HSPBP1Q9NZL4 362 aa11.54□□□□□ -0.56
DDX41-216ENST00000513562 H3BQV1 296 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 KCNK3O14649 394 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 RFPL3O75679 317 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 AP1G2O75843 785 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 DLATP10515 647 aaKnown RBP11.53□□□□□ -0.56
DDX41-216ENST00000513562 CDK4P11802 303 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 IDEP14735 1019 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 JUPP14923 745 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 TNNI1P19237 187 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 ACSL1P33121 698 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 CLDN6P56747 220 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 IL9RQ01113 521 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 EIF4HQ15056 248 aaKnown RBP11.53□□□□□ -0.56
DDX41-216ENST00000513562 E2F5Q15329 346 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 KCNT1Q5JUK3 1230 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 SV2BQ7L1I2 683 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 ANKS1BQ7Z6G8 1248 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 OR2T3Q8NH03 318 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 TNIP3Q96KP6 325 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 CGRRF1Q99675 332 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 SMOQ99835 787 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 SMYD3Q9H7B4 428 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 NXF1Q9UBU9 619 aaKnown RBP11.53□□□□□ -0.56
DDX41-216ENST00000513562 CCDC39Q9UFE4 941 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 AK5Q9Y6K8 562 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 ASXL3Q9C0F0 2248 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 ATMQ13315 3056 aa11.53□□□□□ -0.56
DDX41-216ENST00000513562 MUC22E2RYF6 1773 aaPredicted RBP11.52□□□□□ -0.57
DDX41-216ENST00000513562 A0A1B0GTQ1 180 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 ENC1O14682 589 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 MDM4O15151 490 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 CYP26A1O43174 497 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 DFNA5O60443 496 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 TSPAN3O60637 253 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 BEST1O76090 585 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 EPHX1P07099 455 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 C1SP09871 688 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 CD27P26842 260 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 ATICP31939 592 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 PLA2G4AP47712 749 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 MYL6P60660 151 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 TLE3Q04726 772 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 TARDBPQ13148 414 aaKnown RBP eCLIP11.52□□□□□ -0.57
DDX41-216ENST00000513562 PSMD6Q15008 389 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 SNRNP35Q16560 246 aaKnown RBP11.52□□□□□ -0.57
DDX41-216ENST00000513562 RRAGBQ5VZM2 374 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 SYAP1Q96A49 352 aaPredicted RBP11.52□□□□□ -0.57
DDX41-216ENST00000513562 BIRC7Q96CA5 298 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 PIWIL1Q96J94 861 aaKnown RBP11.52□□□□□ -0.57
DDX41-216ENST00000513562 ORAI3Q9BRQ5 295 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 GZF1Q9H116 711 aaPredicted RBP11.52□□□□□ -0.57
DDX41-216ENST00000513562 LHX5Q9H2C1 402 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 VRTNQ9H8Y1 702 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 PANK4Q9NVE7 773 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 ELOVL2Q9NXB9 296 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 DNMT3LQ9UJW3 386 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 SCML2Q9UQR0 700 aa11.52□□□□□ -0.57
DDX41-216ENST00000513562 ERVH48-1M5A8F1 160 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 STC2O76061 302 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 SEMA4FO95754 770 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 KLKB1P03952 638 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 CCDC130P13994 396 aa11.51□□□□□ -0.57
DDX41-216ENST00000513562 HOXD13P35453 343 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms