RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 PCDHB7Q9Y5E2 793 aa4.19□□□□□ -1.74
PDLIM5-218ENST00000513341 GCN1Q92616 2671 aaKnown RBP4.19□□□□□ -1.74
PDLIM5-218ENST00000513341 FNDC1Q4ZHG4 1894 aaPredicted RBP4.19□□□□□ -1.74
PDLIM5-218ENST00000513341 KDM3AQ9Y4C1 1321 aa4.19□□□□□ -1.74
PDLIM5-218ENST00000513341 CEP295Q9C0D2 2601 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 MBLAC1A4D2B0 266 aaPredicted RBP4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 TMEM8BA6NDV4 472 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 RRN3P2A6NIE6 340 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 HIDE1A8MVS5 230 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 GOLGA6L22H0YM25 854 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 RNF113AO15541 343 aaKnown RBP4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 LGALS2P05162 132 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 MMEP08473 750 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 VSIG10L2P0DP72 767 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 SNHG28P0DPA3 235 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 GYPEP15421 78 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 NAT1P18440 290 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 SP100P23497 879 aaPredicted RBP4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 SLC16A2P36021 539 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 JAM2P57087 298 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 STARD6P59095 220 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 SP2Q02086 613 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 PPARAQ07869 468 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 SSRP1Q08945 709 aaKnown RBP4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 TRAF1Q13077 416 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 CCDC96Q2M329 555 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 METTL7BQ6UX53 244 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 C15orf39Q6ZRI6 1047 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 CCDC149Q6ZUS6 474 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 CXorf67Q86X51 503 aaPredicted RBP4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 SRRM1Q8IYB3 904 aaKnown RBP4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 ELOA2Q8IYF1 753 aaPredicted RBP4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 MAML2Q8IZL2 1156 aaPredicted RBP4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 FAM9BQ8IZU0 186 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 SLC44A3Q8N4M1 653 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 TMEM57Q8N5G2 664 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 Q8N9P0 234 aaPredicted RBP4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 COLGALT1Q8NBJ5 622 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 LMBR1Q8WVP7 490 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 RIN2Q8WYP3 895 aaPredicted RBP4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 RSPH1Q8WYR4 309 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 ST8SIA2Q92186 375 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 SMG7Q92540 1137 aaKnown RBP4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 TBC1D5Q92609 795 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 GLG1Q92896 1179 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 SENP7Q9BQF6 1050 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 TMEM47Q9BQJ4 181 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 APOL5Q9BWW9 433 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 CWH43Q9H720 699 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 SMURF1Q9HCE7 757 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 IL1RAPL2Q9NP60 686 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 ENTPD7Q9NQZ7 604 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 PXMP2Q9NR77 195 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 RGS18Q9NS28 235 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 TYW1Q9NV66 732 aaKnown RBP4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 TMEM161AQ9NX61 479 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 STK39Q9UEW8 545 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 DPP7Q9UHL4 492 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 ANAPC4Q9UJX5 808 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 GMEB2Q9UKD1 530 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 CBLCQ9ULV8 474 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 EXOC6BQ9Y2D4 811 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 EPN1Q9Y6I3 576 aaPredicted RBP4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 ASPMQ8IZT6 3477 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 IGSF9BQ9UPX0 1349 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 ZFYVE26Q68DK2 2539 aa4.18□□□□□ -1.74
PDLIM5-218ENST00000513341 CNOT1A5YKK6 2376 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 TRAV20A0A0B4J274 112 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 FAM221BA6H8Z2 402 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 GOLGA8BA8MQT2 603 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 M0QZ92 97 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 NCAM2O15394 837 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 GPAA1O43292 621 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 ANP32CO43423 234 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 ORC4O43929 436 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 CSPG5O95196 566 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 CXCL14O95715 111 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 JUNP05412 331 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 RETP07949 1114 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 PDHBP11177 359 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 UBA1P22314 1058 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 CD52P31358 61 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 HSD17B4P51659 736 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 LIMK1P53667 647 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 POLGP54098 1239 aaPredicted RBP4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 BLOC1S1P78537 153 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 MRPS6P82932 125 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 ZNF543Q08ER8 600 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 PGM5Q15124 567 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 SEC23AQ15436 765 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 CRY1Q16526 586 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 LETM2Q2VYF4 491 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 PLPP4Q5VZY2 271 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 CEP85Q6P2H3 762 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 DCLRE1AQ6PJP8 1040 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 C1QL2Q7Z5L3 287 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 CELF5Q8N6W0 485 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 KBTBD3Q8NAB2 608 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 SIMC1Q8NDZ2 872 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 ZSWIM2Q8NEG5 633 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms