RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 HDCP19113 662 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 ABCB4P21439 1286 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 RRM1P23921 792 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 WEE1P30291 646 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 ATP5C1P36542 298 aaKnown RBP7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 AVPR1AP37288 418 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 COPS2P61201 443 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 SPA17Q15506 151 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 PLEKHA7Q6IQ23 1121 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 DNAJC24Q6P3W2 148 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 MTSS1LQ765P7 747 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 RSRC2Q7L4I2 434 aaKnown RBP7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 ARCQ7LC44 396 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 LRRC8AQ8IWT6 810 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 CMTM8Q8IZV2 173 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 CTNNBL1Q8WYA6 563 aaPredicted RBP7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 NDRG1Q92597 394 aaKnown RBP7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 ASB16Q96NS5 453 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 MYADMQ96S97 322 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 EIF3CQ99613 913 aaKnown RBP7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 SELENOOQ9BVL4 669 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 SLC46A2Q9BY10 475 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 NACA2Q9H009 215 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 CCSER2Q9H7U1 834 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 MRPL47Q9HD33 250 aaKnown RBP7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 METTL5Q9NRN9 209 aaKnown RBP7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 SPTLC3Q9NUV7 552 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 OSER1Q9NX31 292 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 RRN3Q9NYV6 651 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 EPS15L1Q9UBC2 864 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 CNOT8Q9UFF9 292 aaKnown RBP7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 PRKAG3Q9UGI9 489 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 INTUQ9ULD6 942 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 STAP1Q9ULZ2 295 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 EPN1Q9Y6I3 576 aaPredicted RBP7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 SCINQ9Y6U3 715 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 NYNRINQ9P2P1 1898 aaKnown RBP7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 TCRBV5S1A1TA0A578 114 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 SIGLEC16A6NMB1 481 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 C2CD4DB7Z1M9 353 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 ZNF263O14978 683 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 ARHGAP6O43182 974 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 GRAP2O75791 330 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 H2AFZP0C0S5 128 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 KRT3P12035 628 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 TCF3P15923 654 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 DESP17661 470 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 NOS2P35228 1153 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 FLT3P36888 993 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 MATKP42679 507 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 PGFP49763 221 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 KCNQ1P51787 676 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 GALCP54803 685 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 SLC7A9P82251 487 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 EFEMP1Q12805 493 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 USP4Q13107 963 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 NNTQ13423 1086 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 DCAF6Q58WW2 860 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 C10orf120Q5SQS8 335 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 DCUN1D2Q6PH85 259 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 RAD9BQ6WBX8 426 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 H2AFVQ71UI9 128 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 DDX42Q86XP3 938 aaKnown RBP eCLIP7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 DNAAF5Q86Y56 855 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 ARID3BQ8IVW6 561 aaPredicted RBP7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 ADHFE1Q8IWW8 467 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 DEFB106AQ8N104 65 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 TXLNBQ8N3L3 684 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 ARL14EPQ8N8R7 260 aaPredicted RBP7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 ZSCAN18Q8TBC5 510 aaPredicted RBP7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 EDEM1Q92611 657 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 SMARCD2Q92925 531 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 E2F7Q96AV8 911 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 SERPINB11Q96P15 392 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 MCEEQ96PE7 176 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 SLC2A13Q96QE2 648 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 SLC22A12Q96S37 553 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 RNF38Q9H0F5 515 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 THAP2Q9H0W7 228 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 SMOC2Q9H3U7 446 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 TRPV4Q9HBA0 871 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 TDP1Q9NUW8 608 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 PARVAQ9NVD7 372 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 TMEM51Q9NW97 253 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 OBP2AQ9NY56 170 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 MARCH2Q9P0N8 246 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 DNMT3LQ9UJW3 386 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 TMEM59LQ9UK28 342 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 NUDT5Q9UKK9 219 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 ARHGAP26Q9UNA1 814 aa7.92□□□□□ -1.14
HMGXB3-204ENST00000513318 MDM4O15151 490 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 IRAK2O43187 625 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 PRAMEF12O95522 483 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 CYP1A2P05177 515 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 FYNP06241 537 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 TMEM253P0C7T8 217 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 SP100P23497 879 aaPredicted RBP7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 SDC4P31431 198 aa7.91□□□□□ -1.14
HMGXB3-204ENST00000513318 GBP1P32455 592 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms