RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 TGM2P21980 687 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 CD52P31358 61 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 GRSF1Q12849 480 aaKnown RBP eCLIP4.37□□□□□ -1.71
VCAN-209ENST00000513016 PAGE2BQ5JRK9 111 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 CBWD2Q8IUF1 395 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 BEND7Q8N7W2 519 aaPredicted RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 C12orf50Q8NA57 414 aaPredicted RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 STARD8Q92502 1023 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 HSFY1Q96LI6 401 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 PORCNQ9H237 461 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 E9PCH4 1651 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 RNF103-CHMP3A0A140T963 221 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 RASSF10A6NK89 507 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 SNTNA6NMZ2 147 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 HACD1B0YJ81 288 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 H3BM21 787 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 MAFO75444 373 aaPredicted RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 ENDOD1O94919 500 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 GZMAP12544 262 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 ATP1A3P13637 1013 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 CDH8P55286 799 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 INSCQ1MX18 579 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 SEZ6Q53EL9 994 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 KCTD16Q68DU8 428 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 TMCO5AQ8N6Q1 288 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 B3GALNT2Q8NCR0 500 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 SLC39A8Q9C0K1 460 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 EPC1Q9H2F5 836 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 KIAA1522Q9P206 1035 aaPredicted RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 ZMYND8Q9ULU4 1186 aaPredicted RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 PLAAQ9Y263 795 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 SLC37A4O43826 429 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 KRT6AP02538 564 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 LTFP02788 710 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 KRT6BP04259 564 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 FGFR4P22455 802 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 CNTFP26441 200 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 PTPN7P35236 360 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 KRT6CP48668 564 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 CARSP49589 748 aaKnown RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 CLNS1AP54105 237 aaKnown RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 PPARDQ03181 441 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 SRSF11Q05519 484 aaKnown RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 STK4Q13043 487 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 PKP1Q13835 747 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 LRRC32Q14392 662 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 TIGD5Q53EQ6 642 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 ERMARDQ5T6L9 678 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 GPR158Q5T848 1215 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 GET4Q7L5D6 327 aaPredicted RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 RXFP2Q8WXD0 754 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 FICDQ9BVA6 458 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 PRRG3Q9BZD7 231 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 ZNF711Q9Y462 761 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 ABHD14A-ACY1A0A1B0GW23 586 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 LRRC72A6NJI9 287 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 RAD51BO15315 384 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 GYG2O15488 501 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 CD2BP2O95400 341 aaKnown RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 CLTBP09497 229 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 BDNFP23560 247 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 PPP2R1BP30154 601 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 ERVK-21P61565 698 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 C1QBPQ07021 282 aaKnown RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 GPM6BQ13491 265 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 FLOT2Q14254 428 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 KBTBD12Q3ZCT8 623 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 PPP1R15BQ5SWA1 713 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 ICE2Q659A1 982 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 TATDN1Q6P1N9 297 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 ARNTL2Q8WYA1 636 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 ATP13A3Q9H7F0 1226 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 FAM105AQ9NUU6 356 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 PSMC3IPQ9P2W1 217 aaPredicted RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 CTNNAL1Q9UBT7 734 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 TMCO1Q9UM00 188 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 NEU2Q9Y3R4 380 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 NR2E1Q9Y466 385 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 SDR42E2A6NKP2 422 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 FKBP9O95302 570 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 JCHAINP01591 159 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 KRT8P05787 483 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 SLC9A1P19634 815 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 NOS2P35228 1153 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 MLH1P40692 756 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 GRM5P41594 1212 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 RPIAP49247 311 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 SUZ12Q15022 739 aaKnown RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 KCNA10Q16322 511 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 MPPE1Q53F39 396 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 CBWD3Q5JTY5 395 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 CBWD5Q5RIA9 395 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 FKBP9P1Q75LS8 142 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 IFNL1Q8IU54 200 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 NPAS4Q8IUM7 802 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 CATSPER1Q8NEC5 780 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 ATXN7L3BQ96GX2 97 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 VCPIP1Q96JH7 1222 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 POPDC2Q9HBU9 364 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms