RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 HOXD13P35453 343 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 CXCL12P48061 93 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 LHX1P48742 406 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 RPL10AP62906 217 aaKnown RBP10.08□□□□□ -0.8
TRIO-220ENST00000512979 SATB1Q01826 763 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 PON2Q15165 354 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 SURF1Q15526 300 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 CCDC142Q17RM4 750 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 DUOXA2Q1HG44 320 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 SOWAHAQ2M3V2 549 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 FAM26FQ5R3K3 315 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 TXNDC8Q6A555 127 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 SHC4Q6S5L8 630 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 Q6ZS52 159 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 SPATC1Q76KD6 591 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 SPATA2LQ8IUW3 424 aaPredicted RBP10.08□□□□□ -0.8
TRIO-220ENST00000512979 SPEM1Q8N4L4 309 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 OR5B17Q8NGF7 314 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 SPATA18Q8TC71 538 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 MRPS31Q92665 395 aaKnown RBP10.08□□□□□ -0.8
TRIO-220ENST00000512979 USP13Q92995 863 aaPredicted RBP10.08□□□□□ -0.8
TRIO-220ENST00000512979 SECISBP2LQ93073 1101 aaKnown RBP10.08□□□□□ -0.8
TRIO-220ENST00000512979 SNX21Q969T3 373 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 RMDN1Q96DB5 314 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 HPDLQ96IR7 371 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 PKMYT1Q99640 499 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 C7orf25Q9BPX7 421 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 BRINP2Q9C0B6 783 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 KRT82Q9NSB4 513 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 GTF3C4Q9UKN8 822 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 CCL26Q9Y258 94 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 GABRDO14764 452 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 POLR2DO15514 142 aaKnown RBP10.07□□□□□ -0.8
TRIO-220ENST00000512979 TADA3O75528 432 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 NOL4O94818 638 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 DLATP10515 647 aaKnown RBP10.07□□□□□ -0.8
TRIO-220ENST00000512979 PSMC1P62191 440 aaKnown RBP10.07□□□□□ -0.8
TRIO-220ENST00000512979 ITPRIPL2Q3MIP1 535 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 C2orf27AQ580R0 203 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 DGKKQ5KSL6 1271 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 TRIM68Q6AZZ1 485 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 CNNM4Q6P4Q7 775 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 UNC13DQ70J99 1090 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 EPM2AIP1Q7L775 607 aaPredicted RBP10.07□□□□□ -0.8
TRIO-220ENST00000512979 HDXQ7Z353 690 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 MON1AQ86VX9 555 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 WDR49Q8IV35 697 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 SCN4BQ8IWT1 228 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 NELFCDQ8IXH7 590 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 ZNF507Q8TCN5 953 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 FUBP3Q96I24 572 aaKnown RBP eCLIP10.07□□□□□ -0.8
TRIO-220ENST00000512979 SYT15Q9BQS2 421 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 BLZF1Q9H2G9 400 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 KIF9Q9HAQ2 790 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 MAGEF1Q9HAY2 307 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 KIAA1586Q9HCI6 787 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 TRPC7Q9HCX4 862 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 AGPAT3Q9NRZ7 376 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 GKN1Q9NS71 199 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 UXTQ9UBK9 157 aaPredicted RBP10.07□□□□□ -0.8
TRIO-220ENST00000512979 REV1Q9UBZ9 1251 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 GMEB2Q9UKD1 530 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 PRKAB1Q9Y478 270 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 UBE4BO95155 1302 aa10.07□□□□□ -0.8
TRIO-220ENST00000512979 NUP210Q8TEM1 1887 aaPredicted RBP10.06□□□□□ -0.8
TRIO-220ENST00000512979 CLIC2O15247 247 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 TGFB1I1O43294 461 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 EIF4EBP3O60516 100 aaPredicted RBP10.06□□□□□ -0.8
TRIO-220ENST00000512979 ATP2C2O75185 946 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 CTSBP07858 339 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 ZSCAN22P10073 491 aaPredicted RBP10.06□□□□□ -0.8
TRIO-220ENST00000512979 TNNI1P19237 187 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 LMO2P25791 158 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 CASP1P29466 404 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 ME1P48163 572 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 CYP2J2P51589 502 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 DMWDQ09019 674 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 RUNX3Q13761 415 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 SNRNP35Q16560 246 aaKnown RBP10.06□□□□□ -0.8
TRIO-220ENST00000512979 LPAL2Q16609 132 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 CFAP221Q4G0U5 840 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 MRM1Q6IN84 353 aaKnown RBP10.06□□□□□ -0.8
TRIO-220ENST00000512979 CC2D1AQ6P1N0 951 aaPredicted RBP10.06□□□□□ -0.8
TRIO-220ENST00000512979 FAM171BQ6P995 826 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 C20orf204Q6ZNR8 217 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 C4orf50Q6ZRC1 276 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 PRR23BQ6ZRT6 265 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 TRAPPC11Q7Z392 1133 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 LIMS2Q7Z4I7 341 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 KIAA0907Q7Z7F0 614 aaPredicted RBP10.06□□□□□ -0.8
TRIO-220ENST00000512979 RIN3Q8TB24 985 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 THAP3Q8WTV1 239 aaPredicted RBP10.06□□□□□ -0.8
TRIO-220ENST00000512979 SCFD1Q8WVM8 642 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 KBTBD7Q8WVZ9 684 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 MYLPFQ96A32 169 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 ELMO3Q96BJ8 720 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 CCDC127Q96BQ5 260 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 TRMT2BQ96GJ1 504 aaKnown RBP10.06□□□□□ -0.8
TRIO-220ENST00000512979 FNBP1Q96RU3 617 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 MMS19Q96T76 1030 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms