RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 METTL23Q86XA0 190 aa13.11□□□□□ -0.31
SDHA-215ENST00000512962 DCP1BQ8IZD4 617 aaKnown RBP13.11□□□□□ -0.31
SDHA-215ENST00000512962 ADGRG2Q8IZP9 1017 aa13.11□□□□□ -0.31
SDHA-215ENST00000512962 PDCL2Q8N4E4 241 aa13.11□□□□□ -0.31
SDHA-215ENST00000512962 CEP76Q8TAP6 659 aa13.11□□□□□ -0.31
SDHA-215ENST00000512962 BAHD1Q8TBE0 780 aaPredicted RBP13.11□□□□□ -0.31
SDHA-215ENST00000512962 LEO1Q8WVC0 666 aaPredicted RBP13.11□□□□□ -0.31
SDHA-215ENST00000512962 NSUN5Q96P11 429 aaKnown RBP13.11□□□□□ -0.31
SDHA-215ENST00000512962 ACOX2Q99424 681 aa13.11□□□□□ -0.31
SDHA-215ENST00000512962 MSTO1Q9BUK6 570 aa13.11□□□□□ -0.31
SDHA-215ENST00000512962 ARHGEF4Q9NR80 690 aa13.11□□□□□ -0.31
SDHA-215ENST00000512962 SMPD4Q9NXE4 827 aa13.11□□□□□ -0.31
SDHA-215ENST00000512962 DPP3Q9NY33 737 aa13.11□□□□□ -0.31
SDHA-215ENST00000512962 DKK4Q9UBT3 224 aa13.11□□□□□ -0.31
SDHA-215ENST00000512962 CYP8B1Q9UNU6 501 aa13.11□□□□□ -0.31
SDHA-215ENST00000512962 NAV2Q8IVL1 2488 aa13.11□□□□□ -0.31
SDHA-215ENST00000512962 A0A0A0MRY4 1105 aa13.1□□□□□ -0.31
SDHA-215ENST00000512962 TRABD2BA6NFA1 517 aa13.1□□□□□ -0.31
SDHA-215ENST00000512962 KPNA7A9QM74 516 aa13.1□□□□□ -0.31
SDHA-215ENST00000512962 HNRNPDLO14979 420 aaKnown RBP13.1□□□□□ -0.31
SDHA-215ENST00000512962 ATP2C2O75185 946 aa13.1□□□□□ -0.31
SDHA-215ENST00000512962 PIGRP01833 764 aa13.1□□□□□ -0.31
SDHA-215ENST00000512962 CENPBP07199 599 aaPredicted RBP13.1□□□□□ -0.31
SDHA-215ENST00000512962 SLC12A3P55017 1021 aa13.1□□□□□ -0.31
SDHA-215ENST00000512962 C19orf57Q0VDD7 668 aa13.1□□□□□ -0.31
SDHA-215ENST00000512962 SMARCB1Q12824 385 aa13.1□□□□□ -0.31
SDHA-215ENST00000512962 RESTQ13127 1097 aa13.1□□□□□ -0.31
SDHA-215ENST00000512962 PLEKHG6Q3KR16 790 aa13.1□□□□□ -0.31
SDHA-215ENST00000512962 LMBRD2Q68DH5 695 aaPredicted RBP13.1□□□□□ -0.31
SDHA-215ENST00000512962 TMPRSS7Q7RTY8 843 aa13.1□□□□□ -0.31
SDHA-215ENST00000512962 ZSWIM2Q8NEG5 633 aa13.1□□□□□ -0.31
SDHA-215ENST00000512962 PIP4K2CQ8TBX8 421 aa13.1□□□□□ -0.31
SDHA-215ENST00000512962 SPATA18Q8TC71 538 aa13.1□□□□□ -0.31
SDHA-215ENST00000512962 WBP2Q969T9 261 aa13.1□□□□□ -0.31
SDHA-215ENST00000512962 TRIM9Q9C026 710 aa13.1□□□□□ -0.31
SDHA-215ENST00000512962 LIN7BQ9HAP6 207 aa13.1□□□□□ -0.31
SDHA-215ENST00000512962 PCDHB6Q9Y5E3 794 aa13.1□□□□□ -0.31
SDHA-215ENST00000512962 A0A1W2PQD8 194 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 OLFM2O95897 454 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 APODP05090 189 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 DPP6P42658 865 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 SLC14A1Q13336 389 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 ORC2Q13416 577 aaPredicted RBP13.09□□□□□ -0.31
SDHA-215ENST00000512962 HNRNPDQ14103 355 aaKnown RBP13.09□□□□□ -0.31
SDHA-215ENST00000512962 ZRSR1Q15695 479 aaKnown RBP13.09□□□□□ -0.31
SDHA-215ENST00000512962 PCSK4Q6UW60 755 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 CRELD2Q6UXH1 353 aaPredicted RBP13.09□□□□□ -0.31
SDHA-215ENST00000512962 SCN4BQ8IWT1 228 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 VWA5B2Q8N398 1253 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 NAT16Q8N8M0 369 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 CCDC26Q8TAB7 109 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 CXorf38Q8TB03 319 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 UBL7Q96S82 380 aaPredicted RBP13.09□□□□□ -0.31
SDHA-215ENST00000512962 FIZ1Q96SL8 496 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 TCF12Q99081 682 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 CCSER2Q9H7U1 834 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 ABCB6Q9NP58 842 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 DDX43Q9NXZ2 648 aaKnown RBP13.09□□□□□ -0.31
SDHA-215ENST00000512962 UXTQ9UBK9 157 aaPredicted RBP13.09□□□□□ -0.31
SDHA-215ENST00000512962 BTBD3Q9Y2F9 522 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 CPQQ9Y646 472 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 SLCO1B1Q9Y6L6 691 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 GOLGA4Q13439 2230 aaKnown RBP13.09□□□□□ -0.31
SDHA-215ENST00000512962 MYO18BQ8IUG5 2567 aa13.09□□□□□ -0.31
SDHA-215ENST00000512962 HOXB2P14652 356 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 CLDN6P56747 220 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 RPL10AP62906 217 aaKnown RBP13.08□□□□□ -0.32
SDHA-215ENST00000512962 TSPY1Q01534 308 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 TRIM29Q14134 588 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 NFE2Q16621 373 aaPredicted RBP13.08□□□□□ -0.32
SDHA-215ENST00000512962 ZNF394Q53GI3 561 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 LY6G5CQ5SRR4 150 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 ERICH6BQ5W0A0 696 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 EGFLAMQ63HQ2 1017 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 FOXR1Q6PIV2 292 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 HS2ST1Q7LGA3 356 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 ZNF843Q8N446 348 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 ZNF513Q8N8E2 541 aaPredicted RBP13.08□□□□□ -0.32
SDHA-215ENST00000512962 SYT2Q8N9I0 419 aaPredicted RBP13.08□□□□□ -0.32
SDHA-215ENST00000512962 SREK1Q8WXA9 508 aaKnown RBP13.08□□□□□ -0.32
SDHA-215ENST00000512962 KCNN1Q92952 543 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 REEP2Q9BRK0 252 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 TMEM30AQ9NV96 361 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 PPP4R2Q9NY27 417 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 CFAP97Q9P2B7 532 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 APOBEC2Q9Y235 224 aaKnown RBP13.08□□□□□ -0.32
SDHA-215ENST00000512962 DERAQ9Y315 318 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 C2CD2Q9Y426 696 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 RAI2Q9Y5P3 530 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 RAD54BQ9Y620 910 aa13.08□□□□□ -0.32
SDHA-215ENST00000512962 COL5A1P20908 1838 aaPredicted RBP13.08□□□□□ -0.32
SDHA-215ENST00000512962 PTPRQQ9UMZ3 2332 aa13.07□□□□□ -0.32
SDHA-215ENST00000512962 MYMKA6NI61 221 aa13.07□□□□□ -0.32
SDHA-215ENST00000512962 K7ENM7 598 aa13.07□□□□□ -0.32
SDHA-215ENST00000512962 LCE2BO14633 110 aa13.07□□□□□ -0.32
SDHA-215ENST00000512962 SYPP08247 313 aa13.07□□□□□ -0.32
SDHA-215ENST00000512962 ADH5P11766 374 aa13.07□□□□□ -0.32
SDHA-215ENST00000512962 POLR2BP30876 1174 aaKnown RBP13.07□□□□□ -0.32
SDHA-215ENST00000512962 EIF2DP41214 584 aaKnown RBP13.07□□□□□ -0.32
SDHA-215ENST00000512962 GRIA2P42262 883 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms