RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ARHGAP15Q53QZ3 475 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 SLC9A4Q6AI14 798 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 FCRL6Q6DN72 434 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 Q6ZNX1 250 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 USP49Q70CQ1 688 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 SMAP1Q8IYB5 467 aaPredicted RBP4.85□□□□□ -1.63
HTT-210ENST00000512909 CPXCR1Q8N123 301 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 LNX2Q8N448 690 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 SIRT6Q8N6T7 355 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 PPM1EQ8WY54 764 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 SLC9A6Q92581 669 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 SLC39A13Q96H72 371 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 ZBTB45Q96K62 511 aaPredicted RBP4.85□□□□□ -1.63
HTT-210ENST00000512909 FAM227BQ96M60 508 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 VN1R3Q9BXE9 311 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 ARHGEF3Q9NR81 526 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 CA14Q9ULX7 337 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 CAPN11Q9UMQ6 739 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 DRG1Q9Y295 367 aaKnown RBP4.85□□□□□ -1.63
HTT-210ENST00000512909 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.85□□□□□ -1.63
HTT-210ENST00000512909 SNX14Q9Y5W7 946 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 CENPJQ9HC77 1338 aaPredicted RBP4.85□□□□□ -1.63
HTT-210ENST00000512909 NWD1Q149M9 1564 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 PIK3C2GO75747 1445 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 DCCP43146 1447 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 ROCK2O75116 1388 aaKnown RBP4.84□□□□□ -1.63
HTT-210ENST00000512909 PNPLA6Q8IY17 1366 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 ACEP12821 1306 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 EVC2Q86UK5 1308 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 LGALS16A8MUM7 142 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 C1QTNF3-AMACRE9PGA6 284 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 FCHO1O14526 889 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 PLSCR1O15162 318 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 MPPED1O15442 326 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 IRAK2O43187 625 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 USP1O94782 785 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 RHOP08100 348 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 ITGA2BP08514 1039 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 PDHA1P08559 390 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 EBLN1P0CF75 366 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 EGR2P11161 476 aaPredicted RBP4.84□□□□□ -1.63
HTT-210ENST00000512909 ZNF37AP17032 561 aaPredicted RBP4.84□□□□□ -1.63
HTT-210ENST00000512909 AKT1P31749 480 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 ZEB1P37275 1124 aaPredicted RBP4.84□□□□□ -1.63
HTT-210ENST00000512909 IL6STP40189 918 aaPredicted RBP4.84□□□□□ -1.63
HTT-210ENST00000512909 CCT5P48643 541 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 CSHL1Q14406 222 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 SPARCL1Q14515 664 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 PUM1Q14671 1186 aaKnown RBP eCLIP4.84□□□□□ -1.63
HTT-210ENST00000512909 SLC5A9Q2M3M2 681 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 MANEALQ5VSG8 457 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 RINLQ6ZS11 566 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 ZNF551Q7Z340 670 aaPredicted RBP4.84□□□□□ -1.63
HTT-210ENST00000512909 KRT27Q7Z3Y8 459 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 TMPRSS9Q7Z410 1059 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 MRGPREQ86SM8 312 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 UNC5CLQ8IV45 518 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.84□□□□□ -1.63
HTT-210ENST00000512909 NRSN1Q8IZ57 195 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 C11orf44Q8N8P7 122 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 ABHD11Q8NFV4 315 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 TRAPPC12Q8WVT3 735 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 NEU4Q8WWR8 484 aaPredicted RBP4.84□□□□□ -1.63
HTT-210ENST00000512909 PBKQ96KB5 322 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 SNX15Q9NRS6 342 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 TFCP2L1Q9NZI6 479 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 SSX2IPQ9Y2D8 614 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 MYRFQ9Y2G1 1151 aa4.84□□□□□ -1.63
HTT-210ENST00000512909 ASXL1Q8IXJ9 1541 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 PTCH1Q13635 1447 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 PNMA6EA0A0J9YXQ4 647 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 EXOC5O00471 708 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 CSF1RP07333 972 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 NPSP0C0P6 89 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 TMEM225BP0DP42 221 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 CREB1P16220 341 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 PECAM1P16284 738 aaPredicted RBP4.83□□□□□ -1.64
HTT-210ENST00000512909 GABRB3P28472 473 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 NTSR1P30989 418 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 DGKQP52824 942 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 ATXN1P54253 815 aaKnown RBP4.83□□□□□ -1.64
HTT-210ENST00000512909 EIF4A1P60842 406 aaKnown RBP4.83□□□□□ -1.64
HTT-210ENST00000512909 BFSP2Q13515 415 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 RAPGEF1Q13905 1077 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 CBFBQ13951 182 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 RPS6KA2Q15349 733 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 ZXDCQ2QGD7 858 aaPredicted RBP4.83□□□□□ -1.64
HTT-210ENST00000512909 ADCK5Q3MIX3 580 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 ZNF569Q5MCW4 686 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 AKNAD1Q5T1N1 836 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 RAP1GAP2Q684P5 730 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 RINT1Q6NUQ1 792 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 PARS2Q7L3T8 475 aaKnown RBP4.83□□□□□ -1.64
HTT-210ENST00000512909 GRASPQ7Z6J2 395 aaPredicted RBP4.83□□□□□ -1.64
HTT-210ENST00000512909 CERS3Q8IU89 383 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 FAM109AQ8N4B1 249 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 MBD3L2Q8NHZ7 208 aaPredicted RBP4.83□□□□□ -1.64
HTT-210ENST00000512909 FAM71BQ8TC56 605 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 COQ10AQ96MF6 247 aa4.83□□□□□ -1.64
HTT-210ENST00000512909 FAM167BQ9BTA0 163 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms