RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, human

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD1-208	ENST00000512392	KIAA0408	Q6ZU52	694 aa		6.58	□□□□□ -1.36
CHD1-208	ENST00000512392	INTS8	Q75QN2	995 aa	Known RBP	6.58	□□□□□ -1.36
CHD1-208	ENST00000512392	CTAGE6	Q86UF2	777 aa		6.58	□□□□□ -1.36
CHD1-208	ENST00000512392	TMEM200A	Q86VY9	491 aa		6.58	□□□□□ -1.36
CHD1-208	ENST00000512392	CTAGE4	Q8IX94	777 aa		6.58	□□□□□ -1.36
CHD1-208	ENST00000512392	DCBLD1	Q8N8Z6	715 aa		6.58	□□□□□ -1.36
CHD1-208	ENST00000512392	MRPL43	Q8N983	215 aa	Known RBP	6.58	□□□□□ -1.36
CHD1-208	ENST00000512392	ISL2	Q96A47	359 aa		6.58	□□□□□ -1.36
CHD1-208	ENST00000512392	KREMEN1	Q96MU8	473 aa		6.58	□□□□□ -1.36
CHD1-208	ENST00000512392	FAM111A	Q96PZ2	611 aa		6.58	□□□□□ -1.36
CHD1-208	ENST00000512392	CCDC106	Q9BWC9	280 aa		6.58	□□□□□ -1.36
CHD1-208	ENST00000512392	VPS16	Q9H269	839 aa		6.58	□□□□□ -1.36
CHD1-208	ENST00000512392	EHD1	Q9H4M9	534 aa		6.58	□□□□□ -1.36
CHD1-208	ENST00000512392	MMRN2	Q9H8L6	949 aa		6.58	□□□□□ -1.36
CHD1-208	ENST00000512392	G6PC2	Q9NQR9	355 aa		6.58	□□□□□ -1.36
CHD1-208	ENST00000512392	NDUFAF4	Q9P032	175 aa		6.58	□□□□□ -1.36
CHD1-208	ENST00000512392	APPL1	Q9UKG1	709 aa		6.58	□□□□□ -1.36
CHD1-208	ENST00000512392	PSMD14	O00487	310 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	NKRF	O15226	690 aa	Known RBP eCLIP	6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	MATN4	O95460	622 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	CD3E	P07766	207 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	CELA3B	P08861	270 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	MYBL1	P10243	752 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	PCNA	P12004	261 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	PDGFRA	P16234	1089 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	FST	P19883	344 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	KLRK1	P26718	216 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	AVPR2	P30518	371 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	HOXC8	P31273	242 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	PPARG	P37231	505 aa	Predicted RBP	6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	MCAM	P43121	646 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	POLE2	P56282	527 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	GABPB1	Q06547	395 aa	Predicted RBP	6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	MGAT5	Q09328	741 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	NPRL3	Q12980	569 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	BTBD16	Q32M84	506 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	CCDC122	Q5T0U0	273 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	METTL11B	Q5VVY1	283 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	SEZ6L2	Q6UXD5	910 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	PACS1	Q6VY07	963 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	ESPNL	Q6ZVH7	1005 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	RHOT1	Q8IXI2	618 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	HASPIN	Q8TF76	798 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	PRCC	Q92733	491 aa	Predicted RBP	6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	MIEF2	Q96C03	454 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	DTNBP1	Q96EV8	351 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	CTAGE1	Q96RT6	745 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	SH3GL2	Q99962	352 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	HTATIP2	Q9BUP3	242 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	TAOK3	Q9H2K8	898 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	SMARCAD1	Q9H4L7	1026 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	SSU72	Q9NP77	194 aa	Known RBP	6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	ATAD3A	Q9NVI7	634 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	SOHLH2	Q9NX45	425 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	SCOC	Q9UIL1	159 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	KDM3A	Q9Y4C1	1321 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	SMIM30	A4D0T7	59 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392		H0YCG3	227 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	AURKA	O14965	403 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	ZC3H11A	O75152	810 aa	Known RBP eCLIP	6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	ZNF254	O75437	659 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	AHSG	P02765	367 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	PRG2	P13727	222 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	PECAM1	P16284	738 aa	Predicted RBP	6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	SYN1	P17600	705 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	IL10	P22301	178 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	MAGEA4	P43358	317 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	CARS	P49589	748 aa	Known RBP	6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	TFAP4	Q01664	338 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	GPR19	Q15760	415 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	NFIL3	Q16649	462 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	MEP1B	Q16820	701 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	CATSPERE	Q5SY80	951 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	C12orf60	Q5U649	245 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	INO80C	Q6PI98	192 aa	Predicted RBP	6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	MIGA2	Q7L4E1	593 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	DSG4	Q86SJ6	1040 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	LINC00469	Q8N7U9	141 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	ANKS4B	Q8N8V4	417 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	POMGNT2	Q8NAT1	580 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	BBOF1	Q8ND07	529 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	CCHCR1	Q8TD31	782 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	PANK1	Q8TE04	598 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	FAM162A	Q96A26	154 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	CLPTM1L	Q96KA5	538 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	SNX27	Q96L92	541 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	TACO1	Q9BSH4	297 aa	Known RBP	6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	NAA11	Q9BSU3	229 aa	Predicted RBP	6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	MYL10	Q9BUA6	226 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	UTP14A	Q9BVJ6	771 aa	Known RBP	6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	PCDHAC1	Q9H158	963 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	C19orf44	Q9H6X5	657 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	SIRT3	Q9NTG7	399 aa	Predicted RBP	6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	LIPT1	Q9Y234	373 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	WDR37	Q9Y2I8	494 aa		6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	SF3B6	Q9Y3B4	125 aa	Known RBP	6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	MRPL11	Q9Y3B7	192 aa	Known RBP	6.57	□□□□□ -1.36
CHD1-208	ENST00000512392	C16orf96	A6NNT2	1141 aa		6.56	□□□□□ -1.36
CHD1-208	ENST00000512392	TMEM233	B4DJY2	109 aa		6.56	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms