RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 MBD3L2Q8NHZ7 208 aaPredicted RBP5.41□□□□□ -1.54
PDE4D-220ENST00000512069 LPAR3Q9UBY5 353 aa5.41□□□□□ -1.54
PDE4D-220ENST00000512069 A2ML1A8K2U0 1454 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 KIDINS220Q9ULH0 1771 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 PLEKHD1A6NEE1 506 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 DNAJC9-AS1A6NH13 148 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 UBE2Q2LH0YL09 131 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 PPP6CO00743 305 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 KRT18P05783 430 aaKnown RBP5.4□□□□□ -1.54
PDE4D-220ENST00000512069 MYL4P12829 197 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 APEHP13798 732 aaKnown RBP5.4□□□□□ -1.54
PDE4D-220ENST00000512069 NTSR1P30989 418 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 ATICP31939 592 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 MCM5P33992 734 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 FAM187BQ17R55 369 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 RRAGBQ5VZM2 374 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 KSR2Q6VAB6 950 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 ZNF66Q6ZN08 573 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 KIAA0408Q6ZU52 694 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 KRT73Q86Y46 540 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 C12orf76Q8N812 135 aaPredicted RBP5.4□□□□□ -1.54
PDE4D-220ENST00000512069 SUN3Q8TAQ9 357 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 VPS50Q96JG6 964 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 GDF15Q99988 308 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 EIF2AQ9BY44 585 aaKnown RBP5.4□□□□□ -1.54
PDE4D-220ENST00000512069 SLC25A32Q9H2D1 315 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 AS3MTQ9HBK9 375 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 ARNT2Q9HBZ2 717 aa5.4□□□□□ -1.54
PDE4D-220ENST00000512069 SAMD9Q5K651 1589 aa5.4□□□□□ -1.55
PDE4D-220ENST00000512069 IQGAP1P46940 1657 aa5.4□□□□□ -1.55
PDE4D-220ENST00000512069 MLH3Q9UHC1 1453 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 SETBP1Q9Y6X0 1596 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 APOL1O14791 398 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 PRC1O43663 620 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 COQ9O75208 318 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 CYP2D6P10635 497 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 ATF7P17544 494 aaPredicted RBP5.39□□□□□ -1.55
PDE4D-220ENST00000512069 RBL1P28749 1068 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 HTR7P34969 479 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 TM4SF4P48230 202 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 COPB1P53618 953 aaKnown RBP5.39□□□□□ -1.55
PDE4D-220ENST00000512069 EIF4A1P60842 406 aaKnown RBP5.39□□□□□ -1.55
PDE4D-220ENST00000512069 CFHR3Q02985 330 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 ARL13BQ3SXY8 428 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 CERKLQ49MI3 558 aaPredicted RBP5.39□□□□□ -1.55
PDE4D-220ENST00000512069 CCDC181Q5TID7 509 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 SERPINA13PQ6UXR4 307 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 AFAP1Q8N556 730 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 CCDC33Q8N5R6 958 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 PNPLA1Q8N8W4 532 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 CCDC150Q8NCX0 1101 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 ZNF398Q8TD17 642 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 MMS19Q96T76 1030 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 MAGEB5Q9BZ81 275 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 SLC29A3Q9BZD2 475 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 TMOD4Q9NZQ9 345 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 ITSN2Q9NZM3 1697 aa5.39□□□□□ -1.55
PDE4D-220ENST00000512069 DEPDC5O75140 1603 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 ROBO1Q9Y6N7 1651 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 SRCAPQ6ZRS2 3230 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 WDR91A4D1P6 747 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 FGF18O76093 207 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 MYL1P05976 194 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 CYP2A6P11509 494 aaPredicted RBP5.38□□□□□ -1.55
PDE4D-220ENST00000512069 ADRA1DP25100 572 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 DEUP1Q05D60 604 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 MTAPQ13126 283 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 HNRNPA0Q13151 305 aaKnown RBP5.38□□□□□ -1.55
PDE4D-220ENST00000512069 ACOX1Q15067 660 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 SRSF7Q16629 238 aaKnown RBP eCLIP5.38□□□□□ -1.55
PDE4D-220ENST00000512069 CEP78Q5JTW2 689 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 FAM209BQ5JX69 171 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 HIBCHQ6NVY1 386 aaPredicted RBP5.38□□□□□ -1.55
PDE4D-220ENST00000512069 ZNF813Q6ZN06 617 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 LIX1LQ8IVB5 337 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 GALNT16Q8N428 558 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 ABHD5Q8WTS1 349 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 EDC3Q96F86 508 aaKnown RBP5.38□□□□□ -1.55
PDE4D-220ENST00000512069 LRRC46Q96FV0 321 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 KAZALD1Q96I82 304 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 SNX27Q96L92 541 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 GJB4Q9NTQ9 266 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 RNF7Q9UBF6 113 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 ASAP1Q9ULH1 1129 aa5.38□□□□□ -1.55
PDE4D-220ENST00000512069 CDK13Q14004 1512 aaKnown RBP5.38□□□□□ -1.55
PDE4D-220ENST00000512069 INO80B-WBP1J3KQ70 363 aa5.37□□□□□ -1.55
PDE4D-220ENST00000512069 CCNT2O60583 730 aaKnown RBP5.37□□□□□ -1.55
PDE4D-220ENST00000512069 GCATO75600 419 aa5.37□□□□□ -1.55
PDE4D-220ENST00000512069 USP1O94782 785 aa5.37□□□□□ -1.55
PDE4D-220ENST00000512069 NBPF7P0C2Y1 421 aaPredicted RBP5.37□□□□□ -1.55
PDE4D-220ENST00000512069 PRR35P0CG20 571 aa5.37□□□□□ -1.55
PDE4D-220ENST00000512069 TMEM225BP0DP42 221 aa5.37□□□□□ -1.55
PDE4D-220ENST00000512069 KELP23276 732 aa5.37□□□□□ -1.55
PDE4D-220ENST00000512069 MPGP29372 298 aa5.37□□□□□ -1.55
PDE4D-220ENST00000512069 SLC5A2P31639 672 aa5.37□□□□□ -1.55
PDE4D-220ENST00000512069 DNASE1L3Q13609 305 aa5.37□□□□□ -1.55
PDE4D-220ENST00000512069 LARS2Q15031 903 aaKnown RBP5.37□□□□□ -1.55
PDE4D-220ENST00000512069 FAXCQ5TGI0 409 aa5.37□□□□□ -1.55
PDE4D-220ENST00000512069 CCSAPQ6IQ19 270 aaPredicted RBP5.37□□□□□ -1.55
PDE4D-220ENST00000512069 CRTC1Q6UUV9 634 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms