RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	XRCC6	P12956	609 aa	Known RBP eCLIP	6.25	□□□□□ -1.41	9e-7	■□□□□ 8.5
MATR3-218	ENST00000511978	PPP3CB	P16298	524 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	PIK3CB	P42338	1070 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	LILRA4	P59901	499 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	RPS16	P62249	146 aa	Known RBP	6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	KLF10	Q13118	480 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	IFIT5	Q13325	482 aa	Known RBP	6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	RABL6	Q3YEC7	729 aa	Predicted RBP	6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	MAP9	Q49MG5	647 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	SLC44A4	Q53GD3	710 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	DCAF12L1	Q5VU92	463 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	ZKSCAN2	Q63HK3	967 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	VWA1	Q6PCB0	445 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	ATF7IP	Q6VMQ6	1270 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	GAS2L3	Q86XJ1	694 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	LDLRAD3	Q86YD5	345 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	MPP5	Q8N3R9	675 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	ANKRD44	Q8N8A2	993 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	TBC1D16	Q8TBP0	767 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	KAZALD1	Q96I82	304 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	EYA3	Q99504	573 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	MPHOSPH8	Q99549	860 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	PRRX2	Q99811	253 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	NAA15	Q9BXJ9	866 aa	Known RBP	6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	AMBRA1	Q9C0C7	1298 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	MS4A7	Q9GZW8	240 aa	Predicted RBP	6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	USP44	Q9H0E7	712 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	BICC1	Q9H694	974 aa	Known RBP	6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	CYP4F11	Q9HBI6	524 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	POLL	Q9UGP5	575 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	ING1	Q9UK53	422 aa	Predicted RBP	6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	SHOC2	Q9UQ13	582 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	TNN	Q9UQP3	1299 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	EPN1	Q9Y6I3	576 aa	Predicted RBP	6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	ADAMTSL1	Q8N6G6	1762 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	ZNF646	O15015	1829 aa	Predicted RBP	6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	PSME4	Q14997	1843 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	MED23	Q9ULK4	1368 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	MBD3L4	A6NDZ8	208 aa	Predicted RBP	6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	MBD3L3	A6NE82	208 aa	Predicted RBP	6.24	□□□□□ -1.41
MATR3-218	ENST00000511978		F8W8V4	182 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	PYCARD-AS1	I3L0S3	204 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	CYR61	O00622	381 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	DDN	O94850	711 aa	Predicted RBP	6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	UBTFL1	P0CB47	393 aa	Predicted RBP	6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	ZKSCAN1	P17029	563 aa	Predicted RBP	6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	CD6	P30203	668 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	PXN	P49023	591 aa	Predicted RBP	6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	CHRND	Q07001	517 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	CCDC57	Q2TAC2	916 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	ZIK1	Q3SY52	487 aa	Predicted RBP	6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	VPS53	Q5VIR6	699 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	LAYN	Q6UX15	382 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	FTSJ3	Q8IY81	847 aa	Known RBP	6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	GPC2	Q8N158	579 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	SLC16A11	Q8NCK7	471 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	BEND2	Q8NDZ0	799 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	STRBP	Q96SI9	672 aa	Known RBP	6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	NELL2	Q99435	816 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	MEIS3	Q99687	375 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	AIFM2	Q9BRQ8	373 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	PTDSS2	Q9BVG9	487 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	PCED1A	Q9H1Q7	454 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	VPS33B	Q9H267	617 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	DBNDD1	Q9H9R9	158 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	DMTF1	Q9Y222	760 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	SCN9A	Q15858	1988 aa		6.24	□□□□□ -1.41
MATR3-218	ENST00000511978	TMEM191C	A6NGB0	347 aa		6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	YDJC	A8MPS7	323 aa		6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	RHPN2P1	A8MT19	583 aa		6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	FOXN3	O00409	490 aa	Predicted RBP	6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	ECE2	O60344	883 aa		6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	PPIF	P30405	207 aa	Known RBP	6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	MPL	P40238	635 aa		6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	AVPR1B	P47901	424 aa		6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	SEC24C	P53992	1094 aa		6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	LAIR1	Q6GTX8	287 aa		6.23	□□□□□ -1.41
MATR3-218	ENST00000511978		Q6ZNX1	250 aa		6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	TSHZ1	Q6ZSZ6	1077 aa		6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	C11orf96	Q7Z7L8	435 aa		6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	ZNF280B	Q86YH2	543 aa		6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	C16orf71	Q8IYS4	520 aa	Predicted RBP	6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	SLC44A3	Q8N4M1	653 aa		6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	TMEM57	Q8N5G2	664 aa		6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	MYCBPAP	Q8TBZ2	947 aa		6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	FAM136A	Q96C01	138 aa		6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	UNK	Q9C0B0	810 aa	Known RBP	6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	ANKRD2	Q9GZV1	360 aa		6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	CORO2B	Q9UQ03	480 aa		6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	LRRFIP2	Q9Y608	721 aa	Known RBP	6.23	□□□□□ -1.41
MATR3-218	ENST00000511978	ARAP2	Q8WZ64	1704 aa		6.22	□□□□□ -1.41
MATR3-218	ENST00000511978	FOXN1	O15353	648 aa		6.22	□□□□□ -1.41
MATR3-218	ENST00000511978	YY2	O15391	372 aa		6.22	□□□□□ -1.41
MATR3-218	ENST00000511978	TOMM70	O94826	608 aa		6.22	□□□□□ -1.41
MATR3-218	ENST00000511978	ESRRB	O95718	433 aa		6.22	□□□□□ -1.41
MATR3-218	ENST00000511978	IL1R1	P14778	569 aa		6.22	□□□□□ -1.41
MATR3-218	ENST00000511978	VEGFA	P15692	232 aa	Predicted RBP	6.22	□□□□□ -1.41
MATR3-218	ENST00000511978	KLRC1	P26715	233 aa		6.22	□□□□□ -1.41
MATR3-218	ENST00000511978	KLRK1	P26718	216 aa		6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms