RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 VPS11Q9H270 941 aa9.8□□□□□ -0.84
SUB1-209ENST00000511615 USP29Q9HBJ7 922 aa9.8□□□□□ -0.84
SUB1-209ENST00000511615 RAB6BQ9NRW1 208 aa9.8□□□□□ -0.84
SUB1-209ENST00000511615 FAM49BQ9NUQ9 324 aa9.8□□□□□ -0.84
SUB1-209ENST00000511615 OGDHLQ9ULD0 1010 aa9.8□□□□□ -0.84
SUB1-209ENST00000511615 CHMP2BQ9UQN3 213 aa9.8□□□□□ -0.84
SUB1-209ENST00000511615 GINS2Q9Y248 185 aa9.8□□□□□ -0.84
SUB1-209ENST00000511615 A0A1W2PPM1 405 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 TCRBV7S3A2A0A539 114 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 HACD1B0YJ81 288 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 PIK3R2O00459 728 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 PAPSS1O43252 624 aaPredicted RBP9.79□□□□□ -0.84
SUB1-209ENST00000511615 KRT37O76014 449 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 CYP2F1P24903 491 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 TAF6P49848 677 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 CDK7P50613 346 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 CRYBB1P53674 252 aaPredicted RBP9.79□□□□□ -0.84
SUB1-209ENST00000511615 NCALDP61601 193 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 DNAJC3Q13217 504 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 ITGA7Q13683 1181 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 SPDYAQ5MJ70 313 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 FBXO47Q5MNV8 452 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 SH3PXD2AQ5TCZ1 1133 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 TTC39BQ5VTQ0 682 aaPredicted RBP9.79□□□□□ -0.84
SUB1-209ENST00000511615 GDF6Q6KF10 455 aaPredicted RBP9.79□□□□□ -0.84
SUB1-209ENST00000511615 TRNP1Q6NT89 227 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 ALKAL1Q6UXT8 129 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 FAM47EQ6ZV65 393 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 STRADAQ7RTN6 431 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 PSTKQ8IV42 348 aaKnown RBP9.79□□□□□ -0.84
SUB1-209ENST00000511615 TAB3Q8N5C8 712 aaPredicted RBP9.79□□□□□ -0.84
SUB1-209ENST00000511615 PQLC3Q8N755 202 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 DNAJB3Q8WWF6 145 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 SLC44A1Q8WWI5 657 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 ZNF75CPQ92670 426 aaPredicted RBP9.79□□□□□ -0.84
SUB1-209ENST00000511615 KLHL29Q96CT2 875 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 TUBB6Q9BUF5 446 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 CRISPLD2Q9H0B8 497 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 NRDE2Q9H7Z3 1164 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 ETNK2Q9NVF9 386 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 GDAP2Q9NXN4 497 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.79□□□□□ -0.84
SUB1-209ENST00000511615 RCOR3Q9P2K3 495 aaPredicted RBP9.79□□□□□ -0.84
SUB1-209ENST00000511615 TUBGCP4Q9UGJ1 667 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 HEY1Q9Y5J3 304 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.79□□□□□ -0.84
SUB1-209ENST00000511615 TEX264Q9Y6I9 313 aa9.79□□□□□ -0.84
SUB1-209ENST00000511615 KPNA7A9QM74 516 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 KBTBD13C9JR72 458 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 PIRO00625 290 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 LPXNO60711 386 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 HNRNPCL1O60812 293 aaKnown RBP9.78□□□□□ -0.84
SUB1-209ENST00000511615 HUS1O60921 280 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 BANF1O75531 89 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 GCATO75600 419 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 RECQL4O94761 1208 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 STK10O94804 968 aaKnown RBP9.78□□□□□ -0.84
SUB1-209ENST00000511615 HSPA8P11142 646 aaKnown RBP9.78□□□□□ -0.84
SUB1-209ENST00000511615 KCNE1P15382 129 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 TPSB2P20231 275 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 IL4RP24394 825 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 RBL1P28749 1068 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 ARL4AP40617 200 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 RPL34P49207 117 aaKnown RBP9.78□□□□□ -0.84
SUB1-209ENST00000511615 RASSF2P50749 326 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 GAD2Q05329 585 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 PTK7Q13308 1070 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 TPSAB1Q15661 275 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 SLC1A5Q15758 541 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 DPYSL2Q16555 572 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 SOWAHAQ2M3V2 549 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 SLC45A4Q5BKX6 768 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 FAM26DQ5JW98 314 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 FBXO46Q6PJ61 603 aaPredicted RBP9.78□□□□□ -0.84
SUB1-209ENST00000511615 CCDC91Q7Z6B0 441 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 CTU1Q7Z7A3 348 aaKnown RBP9.78□□□□□ -0.84
SUB1-209ENST00000511615 TBC1D1Q86TI0 1168 aaPredicted RBP9.78□□□□□ -0.84
SUB1-209ENST00000511615 SLC26A11Q86WA9 606 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 SCUBE3Q8IX30 993 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 VPS52Q8N1B4 723 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 TMEM130Q8N3G9 435 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 BANPQ8N9N5 519 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 APPL2Q8NEU8 664 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 PCDH19Q8TAB3 1148 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 SH3TC2Q8TF17 1288 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 CENPIQ92674 756 aaPredicted RBP9.78□□□□□ -0.84
SUB1-209ENST00000511615 KHSRPQ92945 711 aaKnown RBP eCLIP9.78□□□□□ -0.845e-7■■□□□ 12.3
SUB1-209ENST00000511615 ARMC5Q96C12 935 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 MTBPQ96DY7 904 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 GLT1D1Q96MS3 346 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 ZMAT2Q96NC0 199 aaKnown RBP9.78□□□□□ -0.84
SUB1-209ENST00000511615 OSMRQ99650 979 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 EIF2AQ9BY44 585 aaKnown RBP9.78□□□□□ -0.84
SUB1-209ENST00000511615 IQCGQ9H095 443 aaKnown RBP9.78□□□□□ -0.84
SUB1-209ENST00000511615 UNC93B1Q9H1C4 597 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 DHX35Q9H5Z1 703 aaKnown RBP9.78□□□□□ -0.84
SUB1-209ENST00000511615 XAB2Q9HCS7 855 aaKnown RBP9.78□□□□□ -0.84
SUB1-209ENST00000511615 GPATCH2LQ9NWQ4 482 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 ZNF180Q9UJW8 692 aa9.78□□□□□ -0.84
SUB1-209ENST00000511615 SQORQ9Y6N5 450 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms