RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 PRAMEF10O60809 474 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 PQBP1O60828 265 aaKnown RBP4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 ERN1O75460 977 aaKnown RBP4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 SUN1O94901 812 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 TFRCP02786 760 aaKnown RBP4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 GRPP07492 148 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 BRAFP15056 766 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 RPL17P18621 184 aaKnown RBP4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 NF2P35240 595 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 SLC11A2P49281 568 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 TAP2Q03519 686 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 SLC13A2Q13183 592 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 CTBP1Q13363 440 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 DYRK1AQ13627 763 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 AMOTQ4VCS5 1084 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 AKNAD1Q5T1N1 836 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 SLC30A10Q6XR72 485 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 MOB2Q70IA6 237 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 CLNKQ7Z7G1 428 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 GPR149Q86SP6 731 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 FAM46DQ8NEK8 389 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 PHKBQ93100 1093 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 NMD3Q96D46 503 aaKnown RBP4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 RNF31Q96EP0 1072 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 HEPHQ9BQS7 1158 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 NAA15Q9BXJ9 866 aaKnown RBP4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 BTBD1Q9H0C5 482 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 ZNF700Q9H0M5 742 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 CASS4Q9NQ75 786 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 CHST12Q9NRB3 414 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 OGDHLQ9ULD0 1010 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 EPG5Q9HCE0 2579 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 TRIM43BA6NCK2 446 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 PI4K2BG5E9Z4 385 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 TBC1D4O60343 1298 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 VPS4BO75351 444 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 NBPF7P0C2Y1 421 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 RARRES1P49788 294 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 ANXA11P50995 505 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 CACNA2D1P54289 1103 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 UCP3P55916 312 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 RPS7P62081 194 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 SCAPQ12770 1279 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 BOP1Q14137 746 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 UBE4AQ14139 1066 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 LMBRD2Q68DH5 695 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 SP5Q6BEB4 398 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 IL31Q6EBC2 164 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 TAF2Q6P1X5 1199 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 ARMC9Q7Z3E5 817 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 SESTD1Q86VW0 696 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 COLGALT2Q8IYK4 626 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 SVIPQ8NHG7 77 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 RAET1EQ8TD07 263 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 TRIM43Q96BQ3 446 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 SLC39A13Q96H72 371 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 MSLNLQ96KJ4 702 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 LBHD1Q9BQE6 289 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 ZNF518BQ9C0D4 1074 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 TMX4Q9H1E5 349 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 UNKLQ9H9P5 680 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 ZNF287Q9HBT7 754 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 SACM1LQ9NTJ5 587 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 SEMA4GQ9NTN9 838 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 COL20A1Q9P218 1284 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 XPR1Q9UBH6 696 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 HESX1Q9UBX0 185 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 AFF4Q9UHB7 1163 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 ZBTB1Q9Y2K1 713 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 USP34Q70CQ2 3546 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 ALPK3Q96L96 1907 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 NCAPD2Q15021 1401 aa4.28□□□□□ -1.72
TOPBP1-208ENST00000511439 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 RHPN2P1A8MT19 583 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 TOR1BO14657 336 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 DCLK1O15075 740 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 PROP1O75360 226 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 SOAT2O75908 522 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 IGLV2-14P01704 120 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 HSP90AB1P08238 724 aaKnown RBP4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 RPS12P25398 132 aaKnown RBP4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 VIPR2P41587 438 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 PIK3CBP42338 1070 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 PTH2RP49190 550 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 VAV2P52735 878 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 SIM1P81133 766 aaPredicted RBP4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 MRPS35P82673 323 aaKnown RBP4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 MC2RQ01718 297 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 FPGSQ05932 587 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 PICALMQ13492 652 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 HDAC1Q13547 482 aaPredicted RBP4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 RAB32Q13637 225 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 HLXQ14774 488 aaPredicted RBP4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 GEN1Q17RS7 908 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 LONRF3Q496Y0 759 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 MICU3Q86XE3 530 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 NBPF5PQ86XG9 351 aaPredicted RBP4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 SLC15A4Q8N697 577 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 PSD4Q8NDX1 1056 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms