RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 PTPN20Q4JDL3 420 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 SYPL2Q5VXT5 272 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 RSRC2Q7L4I2 434 aaKnown RBP12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 PASD1Q8IV76 773 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 FMNL3Q8IVF7 1028 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 RNF139Q8WU17 664 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 PIWIL1Q96J94 861 aaKnown RBP12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 PPP1R13BQ96KQ4 1090 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 DCLK3Q9C098 648 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 NLRC4Q9NPP4 1024 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 ST7Q9NRC1 585 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 SPATA6Q9NWH7 488 aaPredicted RBP12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 C2orf42Q9NWW7 574 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 FBXO10Q9UK96 956 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 STRIP2Q9ULQ0 834 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 ZNF510Q9Y2H8 683 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 TICRRQ7Z2Z1 1910 aa12.27□□□□□ -0.44
HMGXB3-203ENST00000510472 CHURC1-FNTBB4DL54 471 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 PROB1E7EW31 1015 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 PENKP01210 267 aaPredicted RBP12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 IGLV3-25P01717 112 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 ERBB2P04626 1255 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 GLI1P08151 1106 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 SP9P0CG40 484 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 CHRNB2P17787 502 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 CORO1AP31146 461 aaKnown RBP12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 GABRB2P47870 512 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 YWHAZP63104 245 aaKnown RBP12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 FBXO43Q4G163 708 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 PKN3Q6P5Z2 889 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 OLFML1Q6UWY5 402 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 LUZP1Q86V48 1076 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 ZNF677Q86XU0 584 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 C1orf131Q8NDD1 294 aaKnown RBP12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 NEK11Q8NG66 645 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 DQX1Q8TE96 717 aaKnown RBP12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 EXOC4Q96A65 974 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 PLD4Q96BZ4 506 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 SLC39A13Q96H72 371 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 PHOX2BQ99453 314 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 ASNSD1Q9NWL6 643 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 LSM7Q9UK45 103 aaKnown RBP12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 NAALADL1Q9UQQ1 740 aa12.27□□□□□ -0.45
HMGXB3-203ENST00000510472 A0A1W2PQC6 194 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 ANTXRLA6NF34 631 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 K7ESF4 209 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 MSI1O43347 362 aaKnown RBP12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 LAMTOR5O43504 91 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 CACNG3O60359 315 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 TULP3O75386 442 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 GFPT2O94808 682 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 LSM8O95777 96 aaKnown RBP12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 LATS1O95835 1130 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 CYP1A1P04798 512 aaPredicted RBP12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 HMBSP08397 361 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 MMEP08473 750 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 CISD3P0C7P0 127 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 NCAM1P13591 858 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 HOXA6P31267 233 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 CHKAP35790 457 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 NBL1P41271 181 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 STAT1P42224 750 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 CXCL12P48061 93 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 FMO1Q01740 532 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 CDR2Q01850 454 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 RING1Q06587 406 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 NNTQ13423 1086 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 NFKBIBQ15653 356 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 FYB2Q5VWT5 728 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 DENND1CQ8IV53 801 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 SFTPA1Q8IWL2 248 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 CPXM2Q8N436 756 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 TMEM35BQ8NCS4 154 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 ZNF397Q8NF99 534 aaPredicted RBP12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 SLC20A1Q8WUM9 679 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 BAP1Q92560 729 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 ATOH1Q92858 354 aaPredicted RBP12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 AZIN2Q96A70 460 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 SLC2A13Q96QE2 648 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 PNKPQ96T60 521 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 POPDC2Q9HBU9 364 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 WDR35Q9P2L0 1181 aa12.26□□□□□ -0.45
HMGXB3-203ENST00000510472 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.25□□□□□ -0.45
HMGXB3-203ENST00000510472 RNF40O75150 1001 aa12.25□□□□□ -0.45
HMGXB3-203ENST00000510472 KAT7O95251 611 aa12.25□□□□□ -0.45
HMGXB3-203ENST00000510472 TYRP14679 529 aa12.25□□□□□ -0.45
HMGXB3-203ENST00000510472 SCNN1AP37088 669 aa12.25□□□□□ -0.45
HMGXB3-203ENST00000510472 PBX1P40424 430 aa12.25□□□□□ -0.45
HMGXB3-203ENST00000510472 GRIA2P42262 883 aa12.25□□□□□ -0.45
HMGXB3-203ENST00000510472 TNFRSF4P43489 277 aa12.25□□□□□ -0.45
HMGXB3-203ENST00000510472 KIR2DL1P43626 348 aaPredicted RBP12.25□□□□□ -0.45
HMGXB3-203ENST00000510472 HARS2P49590 506 aaKnown RBP12.25□□□□□ -0.45
HMGXB3-203ENST00000510472 CCR3P51677 355 aa12.25□□□□□ -0.45
HMGXB3-203ENST00000510472 NOMO3P69849 1222 aa12.25□□□□□ -0.45
HMGXB3-203ENST00000510472 SATB1Q01826 763 aa12.25□□□□□ -0.45
HMGXB3-203ENST00000510472 SLC6A3Q01959 620 aa12.25□□□□□ -0.45
HMGXB3-203ENST00000510472 CSTF1Q05048 431 aaKnown RBP12.25□□□□□ -0.45
HMGXB3-203ENST00000510472 EFHC1Q5JVL4 640 aa12.25□□□□□ -0.45
HMGXB3-203ENST00000510472 TAF3Q5VWG9 929 aa12.25□□□□□ -0.45
HMGXB3-203ENST00000510472 RNF43Q68DV7 783 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms