RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 TRAPPC3O43617 180 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 ZBED1O96006 694 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 ARL4AP40617 200 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 MAGEA4P43358 317 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 CDR1P51861 262 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 ATXN1P54253 815 aaKnown RBP9.41□□□□□ -0.9
SEC24D-209ENST00000509818 AIF1P55008 147 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 RNASELQ05823 741 aaKnown RBP9.41□□□□□ -0.9
SEC24D-209ENST00000509818 DEUP1Q05D60 604 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 XRCC4Q13426 336 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 KYNUQ16719 465 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 CLLU1OSQ5K130 101 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 C4orf22Q6V702 233 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 CENPUQ71F23 418 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 B4GALNT4Q76KP1 1039 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 BNIPLQ7Z465 357 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 ZC3H18Q86VM9 953 aaKnown RBP9.41□□□□□ -0.9
SEC24D-209ENST00000509818 COLGALT2Q8IYK4 626 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 CCDC185Q8N715 623 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 FAM71DQ8N9W8 422 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 HASPINQ8TF76 798 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 LINC01599Q8WXQ3 324 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 TLCD1Q96CP7 247 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 PAWRQ96IZ0 340 aaKnown RBP9.41□□□□□ -0.9
SEC24D-209ENST00000509818 KCTD15Q96SI1 283 aaPredicted RBP9.41□□□□□ -0.9
SEC24D-209ENST00000509818 SLC9A7Q96T83 725 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 PKMYT1Q99640 499 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 TRIM62Q9BVG3 475 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 PNPLA8Q9NP80 782 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 DMAP1Q9NPF5 467 aaPredicted RBP9.41□□□□□ -0.9
SEC24D-209ENST00000509818 DONSONQ9NYP3 566 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 NINJ2Q9NZG7 142 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 LAMA2P24043 3122 aaKnown RBP9.41□□□□□ -0.9
SEC24D-209ENST00000509818 H3BRJ5 948 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 ENPP3O14638 875 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 NRP1O14786 923 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 EIF3HO15372 352 aaKnown RBP eCLIP9.4□□□□□ -0.9
SEC24D-209ENST00000509818 TCEA3O75764 348 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 DDHD2O94830 711 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 ACSL3O95573 720 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 F9P00740 461 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 AGTP01019 485 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 LTFP02788 710 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 USP17L7P0C7H9 530 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 BDNFP23560 247 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 GDF10P55107 478 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 YWHAHQ04917 246 aaPredicted RBP9.4□□□□□ -0.9
SEC24D-209ENST00000509818 SKIDA1Q1XH10 827 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 SYPL2Q5VXT5 272 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 PM20D1Q6GTS8 502 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 C4orf50Q6ZRC1 276 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 MICALCLQ6ZW33 695 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 BZW1Q7L1Q6 419 aaKnown RBP9.4□□□□□ -0.9
SEC24D-209ENST00000509818 FAM131BQ86XD5 332 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 ZNF280BQ86YH2 543 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 CDKL3Q8IVW4 592 aaPredicted RBP9.4□□□□□ -0.9
SEC24D-209ENST00000509818 FAM126BQ8IXS8 530 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 MICALL1Q8N3F8 863 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 UHMK1Q8TAS1 419 aaKnown RBP9.4□□□□□ -0.9
SEC24D-209ENST00000509818 SEPT8Q92599 483 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 PRCCQ92733 491 aaPredicted RBP9.4□□□□□ -0.9
SEC24D-209ENST00000509818 SERPINB12Q96P63 405 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 CSPG4P5Q96PW8 444 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 ADAM33Q9BZ11 813 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 PHACTR1Q9C0D0 580 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 C10orf88Q9H8K7 445 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 USP29Q9HBJ7 922 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 SAYSD1Q9NPB0 183 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 DNAJC17Q9NVM6 304 aaKnown RBP9.4□□□□□ -0.9
SEC24D-209ENST00000509818 MTMR10Q9NXD2 777 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 NAALADL1Q9UQQ1 740 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 FARP1Q9Y4F1 1045 aaPredicted RBP9.4□□□□□ -0.9
SEC24D-209ENST00000509818 PCDHB7Q9Y5E2 793 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 HEY1Q9Y5J3 304 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 ALPK3Q96L96 1907 aa9.4□□□□□ -0.9
SEC24D-209ENST00000509818 YJEFN3A6XGL0 299 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 E7ENQ6 273 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 PITPNM1O00562 1244 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 ALOX15BO15296 676 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 ITGB1P05556 798 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 FYNP06241 537 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 ABHD2P08910 425 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 CALRP27797 417 aaKnown RBP9.4□□□□□ -0.91
SEC24D-209ENST00000509818 ATP5DP30049 168 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 HPDP32754 393 aaPredicted RBP9.4□□□□□ -0.91
SEC24D-209ENST00000509818 OR1G1P47890 313 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 PSEN1P49768 467 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 ATP1A2P50993 1020 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 IRAK1P51617 712 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 CACNA2D1P54289 1103 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 ARL4CP56559 192 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 MAGOHP61326 146 aaKnown RBP9.4□□□□□ -0.91
SEC24D-209ENST00000509818 PPP2R2AP63151 447 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 GNGT1P63211 74 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 NME3Q13232 169 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 STAT4Q14765 748 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 PLEKHG4Q58EX7 1191 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 EFHC2Q5JST6 749 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 MFSD5Q6N075 450 aa9.4□□□□□ -0.91
SEC24D-209ENST00000509818 HFE2Q6ZVN8 426 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms