RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 ARHGEF26Q96DR7 871 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 PPP1R9BQ96SB3 815 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 KLF16Q9BXK1 252 aaPredicted RBP15.47■□□□□ 0.07
RNF4-213ENST00000509388 TRPV4Q9HBA0 871 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 THG1LQ9NWX6 298 aaKnown RBP15.47■□□□□ 0.07
RNF4-213ENST00000509388 DDIT4Q9NX09 232 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 OBP2AQ9NY56 170 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 CFAP97Q9P2B7 532 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 UVRAGQ9P2Y5 699 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 HBS1LQ9Y450 684 aaKnown RBP15.47■□□□□ 0.07
RNF4-213ENST00000509388 PAXBP1Q9Y5B6 917 aa15.47■□□□□ 0.07
RNF4-213ENST00000509388 TCRBV5S1A1TA0A578 114 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 C2CD4BA6NLJ0 364 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 HEPACAM2A8MVW5 462 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 MYO1FO00160 1098 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 MSI1O43347 362 aaKnown RBP15.46■□□□□ 0.07
RNF4-213ENST00000509388 ECI2O75521 394 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 BMP1P13497 986 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 PSMA2P25787 234 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 NOP2P46087 812 aaKnown RBP15.46■□□□□ 0.07
RNF4-213ENST00000509388 HARS2P49590 506 aaKnown RBP15.46■□□□□ 0.07
RNF4-213ENST00000509388 RPL7AP62424 266 aaKnown RBP15.46■□□□□ 0.07
RNF4-213ENST00000509388 ATP11AP98196 1134 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 DEUP1Q05D60 604 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 TRIP4Q15650 581 aaPredicted RBP15.46■□□□□ 0.07
RNF4-213ENST00000509388 CDO1Q16878 200 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 PPP1R15BQ5SWA1 713 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 POTEHQ6S545 545 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 TAC4Q86UU9 113 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.46■□□□□ 0.07
RNF4-213ENST00000509388 UNC45BQ8IWX7 931 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 ZNF564Q8TBZ8 553 aaPredicted RBP15.46■□□□□ 0.07
RNF4-213ENST00000509388 BPIFB1Q8TDL5 484 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 PLD4Q96BZ4 506 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 CFAP57Q96MR6 1250 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 NPY6RQ99463 290 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 KXD1Q9BQD3 176 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 DESI2Q9BSY9 194 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 IGSF9Q9P2J2 1179 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 SLC12A6Q9UHW9 1150 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 CCL26Q9Y258 94 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 NUMBLQ9Y6R0 609 aa15.46■□□□□ 0.07
RNF4-213ENST00000509388 PATJQ8NI35 1801 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 TMEM191CA6NGB0 347 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 LOC730098B7Z3J9 87 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 RNF8O76064 485 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 APOEP02649 317 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 SLC2A3P11169 496 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 RDXP35241 583 aaKnown RBP15.45■□□□□ 0.06
RNF4-213ENST00000509388 PTPN9P43378 593 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 VAV2P52735 878 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 ZNF143P52747 638 aaPredicted RBP15.45■□□□□ 0.06
RNF4-213ENST00000509388 NAP1L1P55209 391 aaKnown RBP15.45■□□□□ 0.06
RNF4-213ENST00000509388 CCZ1BP86790 482 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 CCZ1P86791 482 aaPredicted RBP15.45■□□□□ 0.06
RNF4-213ENST00000509388 ZP2Q05996 745 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 KIF5AQ12840 1032 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 NNTQ13423 1086 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 CCDC14Q49A88 953 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 NUGGCQ68CJ6 796 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 SLC35G2Q8TBE7 412 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 DEPDC1BQ8WUY9 529 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 RFFLQ8WZ73 363 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 FGF14Q92915 247 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 ZNF830Q96NB3 372 aaPredicted RBP15.45■□□□□ 0.06
RNF4-213ENST00000509388 TBCBQ99426 244 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 CNPY3Q9BT09 278 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 DCLK3Q9C098 648 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 KCNK12Q9HB15 430 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.45■□□□□ 0.06
RNF4-213ENST00000509388 LCMT1Q9UIC8 334 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 ANAPC7Q9UJX3 599 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 TLR6Q9Y2C9 796 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 BRWD1Q9NSI6 2320 aa15.45■□□□□ 0.06
RNF4-213ENST00000509388 C2orf16Q68DN1 1984 aa15.44■□□□□ 0.06
RNF4-213ENST00000509388 E2F8A0AVK6 867 aa15.44■□□□□ 0.06
RNF4-213ENST00000509388 ANHXE9PGG2 379 aa15.44■□□□□ 0.06
RNF4-213ENST00000509388 SLC9A3R1O14745 358 aaPredicted RBP15.44■□□□□ 0.06
RNF4-213ENST00000509388 IRAK2O43187 625 aa15.44■□□□□ 0.06
RNF4-213ENST00000509388 CCDC175P0C221 793 aa15.44■□□□□ 0.06
RNF4-213ENST00000509388 PSMC3P17980 439 aa15.44■□□□□ 0.06
RNF4-213ENST00000509388 CCR1P32246 355 aa15.44■□□□□ 0.06
RNF4-213ENST00000509388 HTR4Q13639 388 aa15.44■□□□□ 0.06
RNF4-213ENST00000509388 C15orf59Q2T9L4 293 aaPredicted RBP15.44■□□□□ 0.06
RNF4-213ENST00000509388 TJAP1Q5JTD0 557 aa15.44■□□□□ 0.06
RNF4-213ENST00000509388 MFSD6LQ8IWD5 586 aa15.44■□□□□ 0.06
RNF4-213ENST00000509388 FNIP1Q8TF40 1166 aa15.44■□□□□ 0.06
RNF4-213ENST00000509388 FAM172AQ8WUF8 416 aa15.44■□□□□ 0.06
RNF4-213ENST00000509388 NT5C3BQ969T7 300 aa15.44■□□□□ 0.06
RNF4-213ENST00000509388 NCAPGQ9BPX3 1015 aa15.44■□□□□ 0.06
RNF4-213ENST00000509388 TRMT61BQ9BVS5 477 aaKnown RBP15.44■□□□□ 0.06
RNF4-213ENST00000509388 WDCPQ9H6R7 721 aa15.44■□□□□ 0.06
RNF4-213ENST00000509388 TBC1D14Q9P2M4 693 aa15.44■□□□□ 0.06
RNF4-213ENST00000509388 IP6K2Q9UHH9 426 aa15.44■□□□□ 0.06
RNF4-213ENST00000509388 ZNF510Q9Y2H8 683 aa15.44■□□□□ 0.06
RNF4-213ENST00000509388 GREB1Q4ZG55 1949 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 STC2O76061 302 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 TCF3P15923 654 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 FCARP24071 287 aa15.43■□□□□ 0.06
RNF4-213ENST00000509388 CORO1AP31146 461 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms