RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 ITIH6Q6UXX5 1313 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 XPO1O14980 1071 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 MDM4O15151 490 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 THAP12O43422 761 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 ERBB2P04626 1255 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 APODP05090 189 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 CYP17A1P05093 508 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 FYNP06241 537 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 HMBSP08397 361 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 ADH5P11766 374 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 SKILP12757 684 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 CDH5P33151 784 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 SLC6A11P48066 632 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 PXNP49023 591 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 ZNF75DP51815 510 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 BCAT1P54687 386 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 PITX1P78337 314 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 GAD2Q05329 585 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 ADIGQ0VDE8 80 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 BST2Q10589 180 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 PTP4A2Q12974 167 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 SIM2Q14190 667 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 TAF5Q15542 800 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 LPAL2Q16609 132 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 C2orf27AQ580R0 203 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 FIGNQ5HY92 759 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 LY6G5CQ5SRR4 150 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 TRNP1Q6NT89 227 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 RHBDF2Q6PJF5 856 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 WDR59Q6PJI9 974 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 NUDT18Q6ZVK8 323 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 CCDC186Q7Z3E2 898 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 ZNF571Q7Z3V5 609 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 LONP2Q86WA8 852 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 MIB1Q86YT6 1006 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 BBS7Q8IWZ6 715 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 SIX6OS1Q8N1H7 587 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 KIAA1958Q8N8K9 716 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 NAT16Q8N8M0 369 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 ACDQ96AP0 544 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 OTUB2Q96DC9 234 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 CDK5RAP1Q96SZ6 601 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 PNKPQ96T60 521 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 SLC4A5Q9BY07 1137 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 ULBP1Q9BZM6 244 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 UBXN6Q9BZV1 441 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 ARHGEF4Q9NR80 690 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 C2orf42Q9NWW7 574 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 RASAL2Q9UJF2 1139 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 GMEB2Q9UKD1 530 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 STRIP2Q9ULQ0 834 aa9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 SMG5Q9UPR3 1016 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-213ENST00000509357 TBC1D3BA6NDS4 549 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 YJEFN3A6XGL0 299 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 E5RJQ4 531 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 E7ENQ6 273 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 K7ESF4 209 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 PAPSS1O43252 624 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 GREM1O60565 184 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 LILRB5O75023 590 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 PAPSS2O95340 614 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 GJB6O95452 261 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 ZBED1O96006 694 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 CYP1A1P04798 512 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 UNGP13051 313 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 LCP1P13796 627 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 CASP14P31944 242 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 CNR2P34972 360 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 OPRD1P41143 372 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 TKTL1P51854 596 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 YWHAGP61981 247 aaKnown RBP eCLIP9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 NOMO3P69849 1222 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 ARID5AQ03989 594 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 KDSRQ06136 332 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 DMWDQ09019 674 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 EFEMP1Q12805 493 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 PDCLQ13371 301 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 ARID5BQ14865 1188 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 PREPLQ4J6C6 727 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 OTUD1Q5VV17 481 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 PM20D1Q6GTS8 502 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 PKN3Q6P5Z2 889 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 KIAA2013Q8IYS2 634 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 DCLK2Q8N568 766 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 SUMF1Q8NBK3 374 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 ANKRD20A12PQ8NF67 263 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 RNF139Q8WU17 664 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 KCTD13Q8WZ19 329 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 NELL1Q92832 810 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 PCMTD1Q96MG8 357 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 HHIPQ96QV1 700 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 KLF16Q9BXK1 252 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 EPC1Q9H2F5 836 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 CYLDQ9NQC7 956 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 SPHK2Q9NRA0 654 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 POLR3BQ9NW08 1133 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 CLIC5Q9NZA1 410 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms