RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 HOXD10P28358 340 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 ARL4AP40617 200 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 ARL4CP56559 192 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 DAOAP59103 153 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 GPX6P59796 221 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 MAP3K21Q5TCX8 1036 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 NCBP2-AS2Q69YL0 99 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 SLC9A4Q6AI14 798 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 METTL23Q86XA0 190 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 TMEM86AQ8N2M4 240 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 CCNYQ8ND76 341 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 RSPH1Q8WYR4 309 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 CDH9Q9ULB4 789 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 CLUHO75153 1309 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 TTC3P53804 2025 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 TMEM120BA0PK00 339 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 DAB1O75553 588 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 PCSK1P29120 753 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 NOS2P35228 1153 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 MMP13P45452 471 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 RAB27AP51159 221 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 GRIK3Q13003 919 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 SCN4BQ8IWT1 228 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 C4orf33Q8N1A6 199 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 ZNF473Q8WTR7 871 aaKnown RBP15.44■□□□□ 0.06
PHF3-209ENST00000509330 DYDC1Q8WWB3 177 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 PGBD4Q96DM1 585 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 PAIP2Q9BPZ3 127 aaKnown RBP15.44■□□□□ 0.06
PHF3-209ENST00000509330 UBN1Q9NPG3 1134 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 DTLQ9NZJ0 730 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 FZD10Q9ULW2 581 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 THSD7BQ9C0I4 1608 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 A0A087WUV0 522 aaPredicted RBP15.43■□□□□ 0.06
PHF3-209ENST00000509330 ZNF623O75123 536 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 BRAFP15056 766 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 RPL9P32969 192 aaKnown RBP15.43■□□□□ 0.06
PHF3-209ENST00000509330 RPL34P49207 117 aaKnown RBP15.43■□□□□ 0.06
PHF3-209ENST00000509330 ATN1P54259 1190 aaPredicted RBP15.43■□□□□ 0.06
PHF3-209ENST00000509330 ARPP19P56211 112 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 AP1B1Q10567 949 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 CLLU1OSQ5K130 101 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 BSPRYQ5W0U4 402 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 LHX8Q68G74 356 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 C3orf62Q6ZUJ4 267 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 PALM2Q8IXS6 379 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 GPR152Q8TDT2 470 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 ZNF296Q8WUU4 475 aaPredicted RBP15.43■□□□□ 0.06
PHF3-209ENST00000509330 DEPDC1BQ8WUY9 529 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 CFAP36Q96G28 342 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 SMARCD1Q96GM5 515 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 TSPAN18Q96SJ8 248 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 HMX1Q9NP08 348 aaPredicted RBP15.43■□□□□ 0.06
PHF3-209ENST00000509330 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.43■□□□□ 0.06
PHF3-209ENST00000509330 STAP1Q9ULZ2 295 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 RASA4BC9J798 803 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 RASA4O43374 803 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 METTL18O95568 372 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 KRT15P19012 456 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 TGM2P21980 687 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 RDXP35241 583 aaKnown RBP15.43■□□□□ 0.06
PHF3-209ENST00000509330 ELK3P41970 407 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 GRIA1P42261 906 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 PGFP49763 221 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 GLB1LQ6UWU2 654 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 RPAINQ86UA6 219 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 PDIK1LQ8N165 341 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 RNF139Q8WU17 664 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 RNF34Q969K3 372 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 SERPINB12Q96P63 405 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 CCDC77Q9BR77 488 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 ETNK1Q9HBU6 452 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 ARHGEF4Q9NR80 690 aa15.43■□□□□ 0.06
PHF3-209ENST00000509330 ABI2Q9NYB9 513 aaPredicted RBP15.43■□□□□ 0.06
PHF3-209ENST00000509330 NT5C1B-RDH14C9J2C7 533 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 GCAP28676 217 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 NUMBP49757 651 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 YWHAGP61981 247 aaKnown RBP eCLIP15.42■□□□□ 0.06
PHF3-209ENST00000509330 MPP2Q14168 576 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 INTS6LQ5JSJ4 861 aaKnown RBP15.42■□□□□ 0.06
PHF3-209ENST00000509330 DENND5BQ6ZUT9 1274 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 STRADAQ7RTN6 431 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 XPO6Q96QU8 1125 aaKnown RBP15.42■□□□□ 0.06
PHF3-209ENST00000509330 NPY6RQ99463 290 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 KLF6Q99612 283 aaPredicted RBP15.42■□□□□ 0.06
PHF3-209ENST00000509330 ROPN1BQ9BZX4 212 aaPredicted RBP15.42■□□□□ 0.06
PHF3-209ENST00000509330 ROPN1Q9HAT0 212 aaPredicted RBP15.42■□□□□ 0.06
PHF3-209ENST00000509330 PTCH2Q9Y6C5 1203 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 MYO18AQ92614 2054 aaKnown RBP15.42■□□□□ 0.06
PHF3-209ENST00000509330 GMNCA6NCL1 334 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 LTFP02788 710 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 VAV1P15498 845 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 STIP1P31948 543 aaKnown RBP15.42■□□□□ 0.06
PHF3-209ENST00000509330 GRIK1P39086 918 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 VEGFBP49765 207 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 PKN2Q16513 984 aaKnown RBP15.42■□□□□ 0.06
PHF3-209ENST00000509330 SLC39A12Q504Y0 691 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 TAOK1Q7L7X3 1001 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 FBF1Q8TES7 1133 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 ALOX15BO15296 676 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 GPR15P49685 360 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms