RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 PIGZQ86VD9 579 aa11.47□□□□□ -0.57
RNF4-212ENST00000509258 SYT12Q8IV01 421 aa11.47□□□□□ -0.57
RNF4-212ENST00000509258 CCDC150Q8NCX0 1101 aa11.47□□□□□ -0.57
RNF4-212ENST00000509258 HMGB4Q8WW32 186 aa11.47□□□□□ -0.57
RNF4-212ENST00000509258 RLN3Q8WXF3 142 aa11.47□□□□□ -0.57
RNF4-212ENST00000509258 TFAP2BQ92481 460 aa11.47□□□□□ -0.57
RNF4-212ENST00000509258 ERLEC1Q96DZ1 483 aa11.47□□□□□ -0.57
RNF4-212ENST00000509258 TMEM176AQ96HP8 235 aa11.47□□□□□ -0.57
RNF4-212ENST00000509258 TLR8Q9NR97 1041 aaKnown RBP11.47□□□□□ -0.57
RNF4-212ENST00000509258 SPHK2Q9NRA0 654 aa11.47□□□□□ -0.57
RNF4-212ENST00000509258 LSM7Q9UK45 103 aaKnown RBP11.47□□□□□ -0.57
RNF4-212ENST00000509258 CTNND2Q9UQB3 1225 aa11.47□□□□□ -0.57
RNF4-212ENST00000509258 NYNRINQ9P2P1 1898 aaKnown RBP11.46□□□□□ -0.57
RNF4-212ENST00000509258 CACNA1GO43497 2377 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 TBC1D3BA6NDS4 549 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 C1QTNF9BB2RNN3 333 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 STC2O76061 302 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 SMC2O95347 1197 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 C1QTNF9P0C862 333 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 PTGER3P43115 390 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 FMO5P49326 533 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 LRRC63Q05C16 580 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 PDE4CQ08493 712 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 GOLGA7BQ2TAP0 167 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 MAP7D1Q3KQU3 841 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 UAP1L1Q3KQV9 507 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 RAB41Q5JT25 222 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 SDE2Q6IQ49 451 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 HTR3DQ70Z44 454 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 CCDC186Q7Z3E2 898 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 TADA2BQ86TJ2 420 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 ARHGEF19Q8IW93 802 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 TMEFF1Q8IYR6 380 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 PGBD3Q8N328 593 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 ZNF513Q8N8E2 541 aaPredicted RBP11.46□□□□□ -0.57
RNF4-212ENST00000509258 UBA3Q8TBC4 463 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 NELFBQ8WX92 580 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 CCDC34Q96HJ3 373 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 XPO6Q96QU8 1125 aaKnown RBP11.46□□□□□ -0.57
RNF4-212ENST00000509258 ACOX2Q99424 681 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 TSG101Q99816 390 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 ADAM33Q9BZ11 813 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 SLC32A1Q9H598 525 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 PNPLA8Q9NP80 782 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 DEC1Q9P2X7 70 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 ARMCX3Q9UH62 379 aaPredicted RBP11.46□□□□□ -0.57
RNF4-212ENST00000509258 NAGPAQ9UK23 515 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 WASF3Q9UPY6 502 aa11.46□□□□□ -0.57
RNF4-212ENST00000509258 TMEM8BA6NDV4 472 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 PRRT4C9JH25 899 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 AP5Z1O43299 807 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 HMBSP08397 361 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 ENGP17813 658 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 ATP5C1P36542 298 aaKnown RBP11.45□□□□□ -0.58
RNF4-212ENST00000509258 WASP42768 502 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 MAPK8P45983 427 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 E2F5Q15329 346 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 ANO4Q32M45 955 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 PKDCCQ504Y2 493 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 C10orf120Q5SQS8 335 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 C10orf76Q5T2E6 689 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 PEAR1Q5VY43 1037 aaPredicted RBP11.45□□□□□ -0.58
RNF4-212ENST00000509258 EGFLAMQ63HQ2 1017 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 SLC23A3Q6PIS1 610 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 SLC36A4Q6YBV0 504 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 TPGS1Q6ZTW0 290 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 RABEPKQ7Z6M1 372 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 ELOA2Q8IYF1 753 aaPredicted RBP11.45□□□□□ -0.58
RNF4-212ENST00000509258 TERB1Q8NA31 727 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 ANKRD52Q8NB46 1076 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 DEFB124Q8NES8 71 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 BHMTQ93088 406 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 DHTKD1Q96HY7 919 aaPredicted RBP11.45□□□□□ -0.58
RNF4-212ENST00000509258 KREMEN1Q96MU8 473 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 ULBP1Q9BZM6 244 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 CD248Q9HCU0 757 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 CD93Q9NPY3 652 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 PLK2Q9NYY3 685 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 MBD1Q9UIS9 605 aaPredicted RBP11.45□□□□□ -0.58
RNF4-212ENST00000509258 TSPAN16Q9UKR8 245 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 CLEC4EQ9ULY5 219 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 ZFYVE26Q68DK2 2539 aa11.45□□□□□ -0.58
RNF4-212ENST00000509258 ATXN2Q99700 1313 aaKnown RBP11.44□□□□□ -0.58
RNF4-212ENST00000509258 NEDD8-MDP1E9PL57 170 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 O00370 1275 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 PIK3R2O00459 728 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 CFIP05156 583 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 CISD3P0C7P0 127 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 HOXB2P14652 356 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 ITPKAP23677 461 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 TKTL1P51854 596 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 ATXN3P54252 364 aaPredicted RBP11.44□□□□□ -0.58
RNF4-212ENST00000509258 APBA1Q02410 837 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 RPL6Q02878 288 aaKnown RBP11.44□□□□□ -0.58
RNF4-212ENST00000509258 ADIGQ0VDE8 80 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 EFEMP1Q12805 493 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 KLHDC10Q6PID8 442 aa11.44□□□□□ -0.58
RNF4-212ENST00000509258 KDF1Q8NAX2 398 aaPredicted RBP11.44□□□□□ -0.58
RNF4-212ENST00000509258 CEP76Q8TAP6 659 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms