RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 BHMTQ93088 406 aa13.12□□□□□ -0.31
PDPN-208ENST00000509009 DHTKD1Q96HY7 919 aaPredicted RBP13.12□□□□□ -0.31
PDPN-208ENST00000509009 CNTNAP3BQ96NU0 1288 aa13.12□□□□□ -0.31
PDPN-208ENST00000509009 CNTNAP3Q9BZ76 1288 aa13.12□□□□□ -0.31
PDPN-208ENST00000509009 DCLK3Q9C098 648 aa13.12□□□□□ -0.31
PDPN-208ENST00000509009 CD248Q9HCU0 757 aa13.12□□□□□ -0.31
PDPN-208ENST00000509009 PLK2Q9NYY3 685 aa13.12□□□□□ -0.31
PDPN-208ENST00000509009 HOOK1Q9UJC3 728 aaKnown RBP13.12□□□□□ -0.31
PDPN-208ENST00000509009 RASAL2Q9UJF2 1139 aa13.12□□□□□ -0.31
PDPN-208ENST00000509009 KIAA1257Q9ULG3 409 aa13.12□□□□□ -0.31
PDPN-208ENST00000509009 CIZ1Q9ULV3 898 aaPredicted RBP13.12□□□□□ -0.31
PDPN-208ENST00000509009 CEP295Q9C0D2 2601 aa13.12□□□□□ -0.31
PDPN-208ENST00000509009 THADAQ6YHU6 1953 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 LNP1A1A4G5 178 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 ZBED1O96006 694 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 PENKP01210 267 aaPredicted RBP13.11□□□□□ -0.31
PDPN-208ENST00000509009 VDRP11473 427 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 HOXB2P14652 356 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 CHKAP35790 457 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 PTGER3P43115 390 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 DGKGP49619 791 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 SLC8A3P57103 927 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 LRMPQ12912 555 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 GOLGA7BQ2TAP0 167 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 SGO2Q562F6 1265 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 SPDYCQ5MJ68 293 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 N4BP2L1Q5TBK1 243 aaPredicted RBP13.11□□□□□ -0.31
PDPN-208ENST00000509009 FYB2Q5VWT5 728 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 SDE2Q6IQ49 451 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 BHLHA9Q7RTU4 235 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 CHPFQ8IZ52 775 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 UBA3Q8TBC4 463 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 IPO4Q8TEX9 1081 aaKnown RBP13.11□□□□□ -0.31
PDPN-208ENST00000509009 SPACA7Q96KW9 195 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 EDEM2Q9BV94 578 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 ULBP1Q9BZM6 244 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 METTL14Q9HCE5 456 aaKnown RBP13.11□□□□□ -0.31
PDPN-208ENST00000509009 TMEM74BQ9NUR3 256 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 MARCH2Q9P0N8 246 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 MAN1B1Q9UKM7 699 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 TSPAN16Q9UKR8 245 aa13.11□□□□□ -0.31
PDPN-208ENST00000509009 AGO1Q9UL18 857 aaKnown RBP13.11□□□□□ -0.31
PDPN-208ENST00000509009 SLC12A8A0AV02 714 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 PPP1R3GB7ZBB8 358 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 WASH3PC4AMC7 463 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 GFRA2O00451 464 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 CDX4O14627 284 aaPredicted RBP13.1□□□□□ -0.31
PDPN-208ENST00000509009 PSMA7O14818 248 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 XPO1O14980 1071 aaKnown RBP13.1□□□□□ -0.31
PDPN-208ENST00000509009 PMM2O15305 246 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 KCNK5O95279 499 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 CD19P15391 556 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 BMP6P22004 513 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 CORO1AP31146 461 aaKnown RBP13.1□□□□□ -0.31
PDPN-208ENST00000509009 FMO5P49326 533 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 YWHAEP62258 255 aaKnown RBP13.1□□□□□ -0.31
PDPN-208ENST00000509009 STIM1Q13586 685 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 PKDCCQ504Y2 493 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 KIAA1211LQ6NV74 962 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 RSRC2Q7L4I2 434 aaKnown RBP13.1□□□□□ -0.31
PDPN-208ENST00000509009 SYT12Q8IV01 421 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 DENND1CQ8IV53 801 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 LMO3Q8TAP4 145 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 TFAP2BQ92481 460 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 CEP63Q96MT8 703 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 GABRG3Q99928 467 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 LRRC4Q9HBW1 653 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 HESX1Q9UBX0 185 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 EVLQ9UI08 416 aaPredicted RBP13.1□□□□□ -0.31
PDPN-208ENST00000509009 STRIP2Q9ULQ0 834 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 SLC27A6Q9Y2P4 619 aa13.1□□□□□ -0.31
PDPN-208ENST00000509009 RNF225M0QZC1 329 aaPredicted RBP13.09□□□□□ -0.31
PDPN-208ENST00000509009 O00370 1275 aa13.09□□□□□ -0.31
PDPN-208ENST00000509009 ZBTB24O43167 697 aaPredicted RBP13.09□□□□□ -0.31
PDPN-208ENST00000509009 GABBR2O75899 941 aa13.09□□□□□ -0.31
PDPN-208ENST00000509009 KCNA4P22459 653 aa13.09□□□□□ -0.31
PDPN-208ENST00000509009 TBXAS1P24557 533 aaPredicted RBP13.09□□□□□ -0.31
PDPN-208ENST00000509009 BCAT1P54687 386 aa13.09□□□□□ -0.31
PDPN-208ENST00000509009 MFAP3P55082 362 aa13.09□□□□□ -0.31
PDPN-208ENST00000509009 CACNA1BQ00975 2339 aa13.09□□□□□ -0.31
PDPN-208ENST00000509009 BST2Q10589 180 aaKnown RBP13.09□□□□□ -0.31
PDPN-208ENST00000509009 TRIP4Q15650 581 aaPredicted RBP13.09□□□□□ -0.31
PDPN-208ENST00000509009 CNGA2Q16280 664 aa13.09□□□□□ -0.31
PDPN-208ENST00000509009 BSPRYQ5W0U4 402 aa13.09□□□□□ -0.31
PDPN-208ENST00000509009 TTI2Q6NXR4 508 aa13.09□□□□□ -0.31
PDPN-208ENST00000509009 LCLAT1Q6UWP7 414 aa13.09□□□□□ -0.31
PDPN-208ENST00000509009 ARMCX6Q7L4S7 300 aa13.09□□□□□ -0.31
PDPN-208ENST00000509009 DEFB119Q8N690 84 aa13.09□□□□□ -0.31
PDPN-208ENST00000509009 KCTD13Q8WZ19 329 aa13.09□□□□□ -0.31
PDPN-208ENST00000509009 ERLEC1Q96DZ1 483 aa13.09□□□□□ -0.31
PDPN-208ENST00000509009 PIWIL1Q96J94 861 aaKnown RBP13.09□□□□□ -0.31
PDPN-208ENST00000509009 CACNA2D2Q9NY47 1150 aa13.09□□□□□ -0.31
PDPN-208ENST00000509009 CALCOCO1Q9P1Z2 691 aa13.09□□□□□ -0.31
PDPN-208ENST00000509009 PILRBQ9UKJ0 227 aa13.09□□□□□ -0.31
PDPN-208ENST00000509009 CLEC4EQ9ULY5 219 aa13.09□□□□□ -0.31
PDPN-208ENST00000509009 NUP205Q92621 2012 aa13.08□□□□□ -0.31
PDPN-208ENST00000509009 YJEFN3A6XGL0 299 aa13.08□□□□□ -0.32
PDPN-208ENST00000509009 E7ENQ6 273 aa13.08□□□□□ -0.32
PDPN-208ENST00000509009 PAEPP09466 180 aa13.08□□□□□ -0.32
PDPN-208ENST00000509009 NDUFV2P19404 249 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms