RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 TMEM175Q9BSA9 504 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 FUCA2Q9BTY2 467 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 HAPLN2Q9GZV7 340 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 NXF3Q9H4D5 531 aaKnown RBP5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 THAP9Q9H5L6 903 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 ZNF552Q9H707 407 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 RXFP1Q9HBX9 757 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 RBAKQ9NYW8 714 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 MSRAQ9UJ68 235 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 UBQLN1Q9UMX0 589 aaKnown RBP5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 C2CD2Q9Y426 696 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 PRKAB1Q9Y478 270 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 ANK1P16157 1881 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 PTPRSQ13332 1948 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 SMIM28A0A1B0GU29 152 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 ARHGEF37A1IGU5 675 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 SYCE3A1L190 88 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 C7orf72A4D263 438 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 PLD2O14939 933 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 PMM2O15305 246 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 DLX3O60479 287 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 N4BP1O75113 896 aaKnown RBP5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 RFPL3O75679 317 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 ALDH2P05091 517 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 RB1P06400 928 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 SNRPB2P08579 225 aaKnown RBP5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 CXCL8P10145 99 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 HARSP12081 509 aaKnown RBP5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 LAG3P18627 525 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 ENDOUP21128 410 aaKnown RBP5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 EEF1GP26641 437 aaKnown RBP5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 LRPAP1P30533 357 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 PPM1AP35813 382 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 ECI1P42126 302 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 ACOT2P49753 483 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 SEPHS1P49903 392 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 CYP2J2P51589 502 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 TPM4P67936 248 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 CYP4F8P98187 520 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 MYL5Q02045 173 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 RNASELQ05823 741 aaKnown RBP5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 SPAG1Q07617 926 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 CYP24A1Q07973 514 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 TUSC3Q13454 348 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 BTG3Q14201 252 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 TESK1Q15569 626 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 FNDC3BQ53EP0 1204 aaKnown RBP5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 TRIM61Q5EBN2 209 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 CLLU1OSQ5K130 101 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 SLC35F1Q5T1Q4 408 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 KLHL10Q6JEL2 608 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 LRSAM1Q6UWE0 723 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 LRRC55Q6ZSA7 311 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 SYDE1Q6ZW31 735 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 WDR49Q8IV35 697 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 FAM186BQ8IYM0 893 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 RNF169Q8NCN4 708 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 GSTCDQ8NEC7 633 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 ANKRD20A12PQ8NF67 263 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 BEST2Q8NFU1 509 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 PARD3BQ8TEW8 1205 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 FAXDC2Q96IV6 333 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 ANKRD36BP1Q96IX9 119 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 CASD1Q96PB1 797 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 GAD1Q99259 594 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 CGRRF1Q99675 332 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 APOL6Q9BWW8 343 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 SLC6A17Q9H1V8 727 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 PCIF1Q9H4Z3 704 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 CRTAC1Q9NQ79 661 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 FAM53CQ9NYF3 392 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 KLHL14Q9P2G3 628 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 MAGEC2Q9UBF1 373 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 GULP1Q9UBP9 304 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 ARMCX3Q9UH62 379 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 HES2Q9Y543 173 aa5.9□□□□□ -1.46
HMGB1P44-201ENST00000508597 GOLGA8IPA6NC78 632 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 TRIM49BA6NDI0 452 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 GOLGA8JA6NMD2 632 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 TBKBP1A7MCY6 615 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 BECN2A8MW95 431 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 LACTBL1A8MY62 500 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 TISP43B9A030 160 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 TMEM189-UBE2V1I3L0A0 370 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 PTGESO14684 152 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 P4HA2O15460 535 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 AKAP3O75969 853 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 TNNC2P02585 160 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 TPM2P07951 284 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 FAM163BP0C2L3 166 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 LCP1P13796 627 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 TNNI1P19237 187 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 AKAP5P24588 427 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 L1CAMP32004 1257 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 MLH1P40692 756 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 PNPLA4P41247 253 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 TNFSF9P41273 254 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 ALDH7A1P49419 539 aaKnown RBP5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 VAMP7P51809 220 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms