RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 DESI2Q9BSY9 194 aa9.02□□□□□ -0.97
USP46-207ENST00000508499 TASP1Q9H6P5 420 aa9.02□□□□□ -0.97
USP46-207ENST00000508499 UBE2ZQ9H832 354 aaPredicted RBP9.02□□□□□ -0.97
USP46-207ENST00000508499 PIDD1Q9HB75 910 aa9.02□□□□□ -0.97
USP46-207ENST00000508499 METTL5Q9NRN9 209 aaKnown RBP9.02□□□□□ -0.97
USP46-207ENST00000508499 HCFC1R1Q9NWW0 138 aa9.02□□□□□ -0.97
USP46-207ENST00000508499 OBP2AQ9NY56 170 aa9.02□□□□□ -0.97
USP46-207ENST00000508499 MYO1AQ9UBC5 1043 aa9.02□□□□□ -0.97
USP46-207ENST00000508499 CHORDC1Q9UHD1 332 aaPredicted RBP9.02□□□□□ -0.97
USP46-207ENST00000508499 CD207Q9UJ71 328 aa9.02□□□□□ -0.97
USP46-207ENST00000508499 DNMT3LQ9UJW3 386 aa9.02□□□□□ -0.97
USP46-207ENST00000508499 MAGED2Q9UNF1 606 aaPredicted RBP9.02□□□□□ -0.97
USP46-207ENST00000508499 TLR6Q9Y2C9 796 aa9.02□□□□□ -0.97
USP46-207ENST00000508499 ZKSCAN5Q9Y2L8 839 aa9.02□□□□□ -0.97
USP46-207ENST00000508499 PAXBP1Q9Y5B6 917 aa9.02□□□□□ -0.97
USP46-207ENST00000508499 PIK3R2O00459 728 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 CAPN9O14815 690 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 IRAK2O43187 625 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 COCHO43405 550 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 CSPG5O95196 566 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 SLC2A3P11169 496 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 RARGP13631 454 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 PDGFRAP16234 1089 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 SDC4P31431 198 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 GBP1P32455 592 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 PGFP49763 221 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 CDR1P51861 262 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 COG7P83436 770 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 ZNF252P-AS1Q0IIN9 211 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 PPP2R5DQ14738 602 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 CBX2Q14781 532 aaPredicted RBP9.01□□□□□ -0.97
USP46-207ENST00000508499 LEXMQ3ZCV2 418 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 CCDC14Q49A88 953 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 ARHGAP15Q53QZ3 475 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 DCAF6Q58WW2 860 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 BRMS1LQ5PSV4 323 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 RARS2Q5T160 578 aaKnown RBP9.01□□□□□ -0.97
USP46-207ENST00000508499 LRRC38Q5VT99 294 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 OTUD1Q5VV17 481 aaPredicted RBP9.01□□□□□ -0.97
USP46-207ENST00000508499 POLNQ7Z5Q5 900 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 DDX42Q86XP3 938 aaKnown RBP eCLIP9.01□□□□□ -0.97
USP46-207ENST00000508499 CMTM8Q8IZV2 173 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 DEFB106AQ8N104 65 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 CCAR2Q8N163 923 aaKnown RBP9.01□□□□□ -0.97
USP46-207ENST00000508499 LRRC57Q8N9N7 239 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 TPCN2Q8NHX9 752 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 JOSD2Q8TAC2 188 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 DQX1Q8TE96 717 aaKnown RBP9.01□□□□□ -0.97
USP46-207ENST00000508499 RXFP2Q8WXD0 754 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 NTAN1Q96AB6 310 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 E2F7Q96AV8 911 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 TRIM44Q96DX7 344 aaPredicted RBP9.01□□□□□ -0.97
USP46-207ENST00000508499 SLC39A13Q96H72 371 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 ZFRQ96KR1 1074 aaKnown RBP9.01□□□□□ -0.97
USP46-207ENST00000508499 ZNF830Q96NB3 372 aaPredicted RBP9.01□□□□□ -0.97
USP46-207ENST00000508499 KIF9Q9HAQ2 790 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 OSGEPQ9NPF4 335 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 CTTNBP2NLQ9P2B4 639 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 SALL4Q9UJQ4 1053 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 ANAPC7Q9UJX3 599 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 STOML2Q9UJZ1 356 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 ARHGAP26Q9UNA1 814 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 ARIH1Q9Y4X5 557 aaPredicted RBP9.01□□□□□ -0.97
USP46-207ENST00000508499 CHD5Q8TDI0 1954 aa9.01□□□□□ -0.97
USP46-207ENST00000508499 TRAV19A0A0A6YYK7 116 aa9□□□□□ -0.97
USP46-207ENST00000508499 A0A1W2PRU2 124 aa9□□□□□ -0.97
USP46-207ENST00000508499 GOLGA8SH3BPF8 625 aa9□□□□□ -0.97
USP46-207ENST00000508499 PROSCO94903 275 aa9□□□□□ -0.97
USP46-207ENST00000508499 TRUB2O95900 331 aaKnown RBP9□□□□□ -0.97
USP46-207ENST00000508499 MYL4P12829 197 aa9□□□□□ -0.97
USP46-207ENST00000508499 HDCP19113 662 aa9□□□□□ -0.97
USP46-207ENST00000508499 FSHRP23945 695 aa9□□□□□ -0.97
USP46-207ENST00000508499 CXCR3P49682 368 aa9□□□□□ -0.97
USP46-207ENST00000508499 ZNF135P52742 658 aaPredicted RBP9□□□□□ -0.97
USP46-207ENST00000508499 OGDHQ02218 1023 aa9□□□□□ -0.97
USP46-207ENST00000508499 NRG1Q02297 640 aaPredicted RBP9□□□□□ -0.97
USP46-207ENST00000508499 SCAPQ12770 1279 aa9□□□□□ -0.97
USP46-207ENST00000508499 TRIP4Q15650 581 aaPredicted RBP9□□□□□ -0.97
USP46-207ENST00000508499 SMAD2Q15796 467 aaKnown RBP9□□□□□ -0.97
USP46-207ENST00000508499 ARHGAP29Q52LW3 1261 aa9□□□□□ -0.97
USP46-207ENST00000508499 VSIG1Q86XK7 387 aa9□□□□□ -0.97
USP46-207ENST00000508499 DNAAF5Q86Y56 855 aa9□□□□□ -0.97
USP46-207ENST00000508499 NPAS3Q8IXF0 933 aa9□□□□□ -0.97
USP46-207ENST00000508499 SYCE1Q8N0S2 351 aa9□□□□□ -0.97
USP46-207ENST00000508499 C12orf76Q8N812 135 aaPredicted RBP9□□□□□ -0.97
USP46-207ENST00000508499 TRIM58Q8NG06 486 aa9□□□□□ -0.97
USP46-207ENST00000508499 GADD45GIP1Q8TAE8 222 aaPredicted RBP9□□□□□ -0.97
USP46-207ENST00000508499 RNF139Q8WU17 664 aa9□□□□□ -0.97
USP46-207ENST00000508499 NDRG1Q92597 394 aaKnown RBP9□□□□□ -0.97
USP46-207ENST00000508499 PLD4Q96BZ4 506 aa9□□□□□ -0.97
USP46-207ENST00000508499 TBCBQ99426 244 aa9□□□□□ -0.97
USP46-207ENST00000508499 KLF16Q9BXK1 252 aaPredicted RBP9□□□□□ -0.97
USP46-207ENST00000508499 SLC46A2Q9BY10 475 aa9□□□□□ -0.97
USP46-207ENST00000508499 RNF38Q9H0F5 515 aa9□□□□□ -0.97
USP46-207ENST00000508499 ATXN3LQ9H3M9 355 aa9□□□□□ -0.97
USP46-207ENST00000508499 RETREG1Q9H6L5 497 aa9□□□□□ -0.97
USP46-207ENST00000508499 CCSER2Q9H7U1 834 aa9□□□□□ -0.97
USP46-207ENST00000508499 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9□□□□□ -0.97
USP46-207ENST00000508499 MARCH2Q9P0N8 246 aa9□□□□□ -0.97
USP46-207ENST00000508499 EPS15L1Q9UBC2 864 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms