RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 CCDC127Q96BQ5 260 aa17.34■□□□□ 0.37
SNF8-205ENST00000507302 OSGEPQ9NPF4 335 aa17.34■□□□□ 0.37
SNF8-205ENST00000507302 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.34■□□□□ 0.37
SNF8-205ENST00000507302 LSM7Q9UK45 103 aaKnown RBP17.34■□□□□ 0.37
SNF8-205ENST00000507302 MEI4A8MW99 385 aa17.33■□□□□ 0.36
SNF8-205ENST00000507302 E9PAM4 449 aa17.33■□□□□ 0.36
SNF8-205ENST00000507302 GOLGA8FQ08AF8 430 aa17.33■□□□□ 0.36
SNF8-205ENST00000507302 GOLGA8DPQ0D2H9 430 aa17.33■□□□□ 0.36
SNF8-205ENST00000507302 STARD3Q14849 445 aa17.33■□□□□ 0.36
SNF8-205ENST00000507302 SLC39A14Q15043 492 aa17.33■□□□□ 0.36
SNF8-205ENST00000507302 SMAD1Q15797 465 aaKnown RBP17.33■□□□□ 0.36
SNF8-205ENST00000507302 GALNT15Q8N3T1 639 aa17.33■□□□□ 0.36
SNF8-205ENST00000507302 SETD7Q8WTS6 366 aaKnown RBP17.33■□□□□ 0.36
SNF8-205ENST00000507302 TMEM174Q8WUU8 243 aa17.33■□□□□ 0.36
SNF8-205ENST00000507302 ERLEC1Q96DZ1 483 aa17.33■□□□□ 0.36
SNF8-205ENST00000507302 PIWIL1Q96J94 861 aaKnown RBP17.33■□□□□ 0.36
SNF8-205ENST00000507302 LRIG1Q96JA1 1093 aa17.33■□□□□ 0.36
SNF8-205ENST00000507302 MED10Q9BTT4 135 aa17.33■□□□□ 0.36
SNF8-205ENST00000507302 PANK2Q9BZ23 570 aa17.33■□□□□ 0.36
SNF8-205ENST00000507302 NACA2Q9H009 215 aa17.33■□□□□ 0.36
SNF8-205ENST00000507302 NMUR1Q9HB89 426 aa17.33■□□□□ 0.36
SNF8-205ENST00000507302 PNPLA8Q9NP80 782 aa17.33■□□□□ 0.36
SNF8-205ENST00000507302 CGNQ9P2M7 1197 aaKnown RBP17.33■□□□□ 0.36
SNF8-205ENST00000507302 NUMA1Q14980 2115 aa17.32■□□□□ 0.36
SNF8-205ENST00000507302 SHROOM3Q8TF72 1996 aa17.32■□□□□ 0.36
SNF8-205ENST00000507302 TRABD2BA6NFA1 517 aa17.32■□□□□ 0.36
SNF8-205ENST00000507302 PAPSS1O43252 624 aaPredicted RBP17.32■□□□□ 0.36
SNF8-205ENST00000507302 STC2O76061 302 aa17.32■□□□□ 0.36
SNF8-205ENST00000507302 VNN1O95497 513 aa17.32■□□□□ 0.36
SNF8-205ENST00000507302 KLKB1P03952 638 aa17.32■□□□□ 0.36
SNF8-205ENST00000507302 C4BPAP04003 597 aaKnown RBP17.32■□□□□ 0.36
SNF8-205ENST00000507302 PLA2G4AP47712 749 aa17.32■□□□□ 0.36
SNF8-205ENST00000507302 AP3M2P53677 418 aa17.32■□□□□ 0.36
SNF8-205ENST00000507302 GEN1Q17RS7 908 aa17.32■□□□□ 0.36
SNF8-205ENST00000507302 GPRIN1Q7Z2K8 1008 aa17.32■□□□□ 0.36
SNF8-205ENST00000507302 ACOT1Q86TX2 421 aa17.32■□□□□ 0.36
SNF8-205ENST00000507302 UNC93AQ86WB7 457 aa17.32■□□□□ 0.36
SNF8-205ENST00000507302 TMPRSS6Q8IU80 811 aa17.32■□□□□ 0.36
SNF8-205ENST00000507302 SLC2A14Q8TDB8 520 aa17.32■□□□□ 0.36
SNF8-205ENST00000507302 NUP58Q9BVL2 599 aa17.32■□□□□ 0.36
SNF8-205ENST00000507302 LRRC27Q9C0I9 530 aa17.32■□□□□ 0.36
SNF8-205ENST00000507302 BTBD3Q9Y2F9 522 aa17.32■□□□□ 0.36
SNF8-205ENST00000507302 KNTC1P50748 2209 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 CLIC2O15247 247 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 CCDC130P13994 396 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 MAP3K7CLP57077 242 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 CUL4AQ13619 759 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 EIF4HQ15056 248 aaKnown RBP17.31■□□□□ 0.36
SNF8-205ENST00000507302 ZNF699Q32M78 642 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 ZNF667Q5HYK9 610 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 FAM26FQ5R3K3 315 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 CLEC20AQ6ZU45 233 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 ADAM32Q8TC27 787 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 RHBDD1Q8TEB9 315 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 PARD3BQ8TEW8 1205 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 COL26A1Q96A83 441 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 SIPA1Q96FS4 1042 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 CUEDC2Q9H467 287 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 EIF2B4Q9UI10 523 aaKnown RBP17.31■□□□□ 0.36
SNF8-205ENST00000507302 DNMT3LQ9UJW3 386 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 ZNF510Q9Y2H8 683 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 PCDHA5Q9Y5H7 936 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 SLCO1B1Q9Y6L6 691 aa17.31■□□□□ 0.36
SNF8-205ENST00000507302 TP53BP1Q12888 1972 aaPredicted RBP17.31■□□□□ 0.36
SNF8-205ENST00000507302 TK2O00142 265 aa17.3■□□□□ 0.36
SNF8-205ENST00000507302 CYP26A1O43174 497 aa17.3■□□□□ 0.36
SNF8-205ENST00000507302 PCDHGA12O60330 932 aa17.3■□□□□ 0.36
SNF8-205ENST00000507302 CASP4P49662 377 aa17.3■□□□□ 0.36
SNF8-205ENST00000507302 CYP2J2P51589 502 aa17.3■□□□□ 0.36
SNF8-205ENST00000507302 CYP4F3Q08477 520 aa17.3■□□□□ 0.36
SNF8-205ENST00000507302 NCOA4Q13772 614 aa17.3■□□□□ 0.36
SNF8-205ENST00000507302 E2F5Q15329 346 aa17.3■□□□□ 0.36
SNF8-205ENST00000507302 FAM173BQ6P4H8 233 aa17.3■□□□□ 0.36
SNF8-205ENST00000507302 SCD5Q86SK9 330 aa17.3■□□□□ 0.36
SNF8-205ENST00000507302 PDCD7Q8N8D1 485 aaKnown RBP17.3■□□□□ 0.36
SNF8-205ENST00000507302 PRCCQ92733 491 aaPredicted RBP17.3■□□□□ 0.36
SNF8-205ENST00000507302 USP28Q96RU2 1077 aa17.3■□□□□ 0.36
SNF8-205ENST00000507302 HNRNPABQ99729 332 aaKnown RBP17.3■□□□□ 0.36
SNF8-205ENST00000507302 C7orf25Q9BPX7 421 aa17.3■□□□□ 0.36
SNF8-205ENST00000507302 MIR1-1HGQ9H1L0 117 aa17.3■□□□□ 0.36
SNF8-205ENST00000507302 PLK2Q9NYY3 685 aa17.3■□□□□ 0.36
SNF8-205ENST00000507302 HMGXB4Q9UGU5 601 aa17.3■□□□□ 0.36
SNF8-205ENST00000507302 A0A1W2PQH9 124 aa17.29■□□□□ 0.36
SNF8-205ENST00000507302 LRRIQ3A6PVS8 624 aaPredicted RBP17.29■□□□□ 0.36
SNF8-205ENST00000507302 TNFSF14O43557 240 aa17.29■□□□□ 0.36
SNF8-205ENST00000507302 RARGP13631 454 aa17.29■□□□□ 0.36
SNF8-205ENST00000507302 CHKAP35790 457 aa17.29■□□□□ 0.36
SNF8-205ENST00000507302 NASPP49321 788 aaPredicted RBP17.29■□□□□ 0.36
SNF8-205ENST00000507302 PSEN1P49768 467 aa17.29■□□□□ 0.36
SNF8-205ENST00000507302 AFF3P51826 1226 aaKnown RBP17.29■□□□□ 0.36
SNF8-205ENST00000507302 KIF11P52732 1056 aa17.29■□□□□ 0.36
SNF8-205ENST00000507302 NDST1P52848 882 aa17.29■□□□□ 0.36
SNF8-205ENST00000507302 CAMK2GQ13555 558 aaPredicted RBP17.29■□□□□ 0.36
SNF8-205ENST00000507302 ZNF234Q14588 700 aa17.29■□□□□ 0.36
SNF8-205ENST00000507302 SUZ12Q15022 739 aaKnown RBP17.29■□□□□ 0.36
SNF8-205ENST00000507302 KIF19Q2TAC6 998 aa17.29■□□□□ 0.36
SNF8-205ENST00000507302 TMEM215Q68D42 235 aa17.29■□□□□ 0.36
SNF8-205ENST00000507302 CCDC186Q7Z3E2 898 aa17.29■□□□□ 0.36
SNF8-205ENST00000507302 MARCH9Q86YJ5 346 aa17.29■□□□□ 0.36
SNF8-205ENST00000507302 FAM217AQ8IXS0 508 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms