RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 NUDT5Q9UKK9 219 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 PCOLCE2Q9UKZ9 415 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.1□□□□□ -1.43
GYPB-208ENST00000507009 SMC3Q9UQE7 1217 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 GTF3C3Q9Y5Q9 886 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 CLIC4Q9Y696 253 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 FREM2Q5SZK8 3169 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 A0A0A0MRY4 1105 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 A0A1B0GTW7 788 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 A0A1B0GVT2 93 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 TRABD2BA6NFA1 517 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 KCNK3O14649 394 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 CLIC2O15247 247 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 SYNCRIPO60506 623 aaKnown RBP6.09□□□□□ -1.43
GYPB-208ENST00000507009 TLR5O60602 858 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 EIF5BO60841 1220 aaKnown RBP6.09□□□□□ -1.43
GYPB-208ENST00000507009 CILPO75339 1184 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 GJB3O75712 270 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 KIF20AO95235 890 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 CER1O95813 267 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 BMP15O95972 392 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 ACADMP11310 421 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 CCDC130P13994 396 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 CD6P30203 668 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 DGKGP49619 791 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 PGFP49763 221 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 SMCPP49901 116 aaPredicted RBP6.09□□□□□ -1.43
GYPB-208ENST00000507009 CLDN6P56747 220 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 MAP3K7CLP57077 242 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 MYL6P60660 151 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 IL9RQ01113 521 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 SLC14A1Q13336 389 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 BIRC3Q13489 604 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 STARD3Q14849 445 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 FUT11Q495W5 492 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 LARP1BQ659C4 914 aaKnown RBP6.09□□□□□ -1.43
GYPB-208ENST00000507009 LAYNQ6UX15 382 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 ACOT1Q86TX2 421 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 WDR49Q8IV35 697 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 NELFCDQ8IXH7 590 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 CCDC65Q8IXS2 484 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 PDILTQ8N807 584 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 DNAJC19Q96DA6 116 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 OTUB2Q96DC9 234 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 ZNF419Q96HQ0 510 aaPredicted RBP6.09□□□□□ -1.43
GYPB-208ENST00000507009 TMX3Q96JJ7 454 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 STRA6Q9BX79 667 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 SMYD3Q9H7B4 428 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 DMAP1Q9NPF5 467 aaPredicted RBP6.09□□□□□ -1.43
GYPB-208ENST00000507009 KRT82Q9NSB4 513 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 FAM49BQ9NUQ9 324 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 HSPBP1Q9NZL4 362 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 STK17AQ9UEE5 414 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 EIF2B4Q9UI10 523 aaKnown RBP6.09□□□□□ -1.43
GYPB-208ENST00000507009 BTBD3Q9Y2F9 522 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 FNDC3AQ9Y2H6 1198 aaKnown RBP6.09□□□□□ -1.43
GYPB-208ENST00000507009 STON1Q9Y6Q2 735 aa6.09□□□□□ -1.43
GYPB-208ENST00000507009 SETXQ7Z333 2677 aaKnown RBP6.09□□□□□ -1.44
GYPB-208ENST00000507009 TMEM131Q92545 1883 aa6.09□□□□□ -1.44
GYPB-208ENST00000507009 BPTFQ12830 3046 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 KCNJ18B7U540 433 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 J3QL48 77 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 BCAT2O15382 392 aaPredicted RBP6.08□□□□□ -1.44
GYPB-208ENST00000507009 CACNG3O60359 315 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 BEST1O76090 585 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 ADORA2BP29275 332 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 ABCG1P45844 678 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 CASP4P49662 377 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 CSNK1EP49674 416 aaKnown RBP6.08□□□□□ -1.44
GYPB-208ENST00000507009 ARID5AQ03989 594 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 GOLGA8FQ08AF8 430 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 GOLGA8DPQ0D2H9 430 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 C19orf57Q0VDD7 668 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 ALCAMQ13740 583 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 SURF1Q15526 300 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 SNRNP35Q16560 246 aaKnown RBP6.08□□□□□ -1.44
GYPB-208ENST00000507009 HLA-BQ31612 363 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 ZNF699Q32M78 642 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 FAM173BQ6P4H8 233 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 DHRS13Q6UX07 377 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 TREML4Q6UXN2 200 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 STXBP4Q6ZWJ1 553 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 LIMS2Q7Z4I7 341 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 ADAT2Q7Z6V5 191 aaKnown RBP6.08□□□□□ -1.44
GYPB-208ENST00000507009 ADAM32Q8TC27 787 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 SORCS1Q8WY21 1168 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 PRCCQ92733 491 aaPredicted RBP6.08□□□□□ -1.44
GYPB-208ENST00000507009 SIPA1Q96FS4 1042 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 CEP295NLQ96MC4 621 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 KIF2CQ99661 725 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 CGRRF1Q99675 332 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 ZDHHC5Q9C0B5 715 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 CIPCQ9C0C6 399 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 TLR8Q9NR97 1041 aaKnown RBP6.08□□□□□ -1.44
GYPB-208ENST00000507009 WDR35Q9P2L0 1181 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 SNX11Q9Y5W9 270 aa6.08□□□□□ -1.44
GYPB-208ENST00000507009 SHROOM3Q8TF72 1996 aa6.07□□□□□ -1.44
GYPB-208ENST00000507009 A0A087X0B3 334 aa6.07□□□□□ -1.44
GYPB-208ENST00000507009 A0A1W2PQH9 124 aa6.07□□□□□ -1.44
GYPB-208ENST00000507009 CBX4O00257 560 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms