RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 ZNF527Q8NB42 609 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 NGDNQ8NEJ9 315 aaKnown RBP3.38□□□□□ -1.87
GYPB-207ENST00000506679 MAFAQ8NHW3 353 aaPredicted RBP3.38□□□□□ -1.87
GYPB-207ENST00000506679 ADAMTS18Q8TE60 1221 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 PNISRQ8TF01 805 aaKnown RBP3.38□□□□□ -1.87
GYPB-207ENST00000506679 POF1BQ8WVV4 589 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 EID2BQ96D98 161 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 PRR11Q96HE9 360 aaPredicted RBP3.38□□□□□ -1.87
GYPB-207ENST00000506679 VPS50Q96JG6 964 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 FYTTD1Q96QD9 318 aaKnown RBP3.38□□□□□ -1.87
GYPB-207ENST00000506679 CRAMP1Q96RY5 1269 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 OBP2BQ9NPH6 170 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 COMMD10Q9Y6G5 202 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 SPATA31A1Q5TZJ5 1347 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 MANSC4A6NHS7 340 aaPredicted RBP3.37□□□□□ -1.87
GYPB-207ENST00000506679 AQP12BA6NM10 295 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 M0QZQ0 153 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 ASNA1O43681 348 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 PEX14O75381 377 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 SKAP2O75563 359 aaPredicted RBP3.37□□□□□ -1.87
GYPB-207ENST00000506679 LDHAP00338 332 aaKnown RBP3.37□□□□□ -1.87
GYPB-207ENST00000506679 TMIGD3P0DMS9 266 aaPredicted RBP3.37□□□□□ -1.87
GYPB-207ENST00000506679 DRD1P21728 446 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 GALNSP34059 522 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 SERPINF1P36955 418 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 COPB1P53618 953 aaKnown RBP3.37□□□□□ -1.87
GYPB-207ENST00000506679 TUBA4AP68366 448 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 RAE1P78406 368 aaKnown RBP3.37□□□□□ -1.87
GYPB-207ENST00000506679 ICA1Q05084 483 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 CCDC15Q0P6D6 951 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 SLC10A2Q12908 348 aaPredicted RBP3.37□□□□□ -1.87
GYPB-207ENST00000506679 GRM4Q14833 912 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 PUM3Q15397 648 aaKnown RBP3.37□□□□□ -1.87
GYPB-207ENST00000506679 PFKFB4Q16877 469 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 TUBB8Q3ZCM7 444 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 ZACNQ401N2 412 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 COLEC12Q5KU26 742 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 PRAMEF17Q5VTA0 474 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 LIN54Q6MZP7 749 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 CCDC144NLQ6NUI1 221 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 SYCE2Q6PIF2 218 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 ZNF66Q6ZN08 573 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 C8orf58Q8NAV2 365 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 STYXQ8WUJ0 223 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 RSC1A1Q92681 617 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 ASB2Q96Q27 587 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 KATNAL1Q9BW62 490 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 CINPQ9BW66 212 aaPredicted RBP3.37□□□□□ -1.87
GYPB-207ENST00000506679 RNF26Q9BY78 433 aaPredicted RBP3.37□□□□□ -1.87
GYPB-207ENST00000506679 TFCP2L1Q9NZI6 479 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 FLRT1Q9NZU1 646 aa3.37□□□□□ -1.87
GYPB-207ENST00000506679 CCDC187A0A096LP49 1063 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 LOC105369274A0A096LPK9 316 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.36□□□□□ -1.87
GYPB-207ENST00000506679 LOC102723532A0A0G2JNH3 316 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 PNMA6EA0A0J9YXQ4 647 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 PRRT4C9JH25 899 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 F5H423 210 aaPredicted RBP3.36□□□□□ -1.87
GYPB-207ENST00000506679 UBE2Q2LH0YL09 131 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 SMIM22K7EJ46 135 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 MASP2O00187 686 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 USP1O94782 785 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 TNFRSF6BO95407 300 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 CSTBP04080 98 aaKnown RBP3.36□□□□□ -1.87
GYPB-207ENST00000506679 SRGAP2BP0DMP2 458 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 CYP2A6P11509 494 aaPredicted RBP3.36□□□□□ -1.87
GYPB-207ENST00000506679 VEGFAP15692 232 aaPredicted RBP3.36□□□□□ -1.87
GYPB-207ENST00000506679 MATN1P21941 496 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 DUSP1P28562 367 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 CD38P28907 300 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 ALDH18A1P54886 795 aaKnown RBP3.36□□□□□ -1.87
GYPB-207ENST00000506679 FOXO1Q12778 655 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 CHAF1AQ13111 956 aaPredicted RBP3.36□□□□□ -1.87
GYPB-207ENST00000506679 CSHL1Q14406 222 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 KCNB1Q14721 858 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 FAM83BQ5T0W9 1011 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 C10orf62Q5T681 223 aaPredicted RBP3.36□□□□□ -1.87
GYPB-207ENST00000506679 TANGO2Q6ICL3 276 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 ACSM6Q6P461 480 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 DCDC5Q6ZRR9 648 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 ZNF575Q86XF7 245 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 GATAD2AQ86YP4 633 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 MYLK4Q86YV6 388 aaPredicted RBP3.36□□□□□ -1.87
GYPB-207ENST00000506679 P3H2Q8IVL5 708 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 CACNA2D3Q8IZS8 1091 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 OR4N4Q8N0Y3 316 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 ENAHQ8N8S7 591 aaPredicted RBP3.36□□□□□ -1.87
GYPB-207ENST00000506679 VPS37AQ8NEZ2 397 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 OR1N1Q8NGS0 311 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 STT3BQ8TCJ2 826 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 GLMPQ8WWB7 406 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 P2RY11Q96G91 374 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 HIC2Q96JB3 615 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 RMDN3Q96TC7 470 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 PRPF18Q99633 342 aaKnown RBP3.36□□□□□ -1.87
GYPB-207ENST00000506679 ABHD10Q9NUJ1 306 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 PTGFRNQ9P2B2 879 aa3.36□□□□□ -1.87
GYPB-207ENST00000506679 MAGED2Q9UNF1 606 aaPredicted RBP3.36□□□□□ -1.87
GYPB-207ENST00000506679 SCAF8Q9UPN6 1271 aaKnown RBP3.36□□□□□ -1.87
GYPB-207ENST00000506679 FRMD4BQ9Y2L6 1034 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms