RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 HOMER2Q9NSB8 354 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 TMOD2Q9NZR1 351 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 PAK5Q9P286 719 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 PI4KBQ9UBF8 816 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 MARCOQ9UEW3 520 aaPredicted RBP16.42■□□□□ 0.22
SCLT1-208ENST00000506368 PRR12Q9ULL5 1215 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 ZNF232Q9UNY5 417 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 MATN2O00339 956 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 GLRA3O75311 464 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 E2F6O75461 281 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 NPM3O75607 178 aaKnown RBP16.41■□□□□ 0.22
SCLT1-208ENST00000506368 YWHABP31946 246 aaKnown RBP16.41■□□□□ 0.22
SCLT1-208ENST00000506368 SYCP2LQ5T4T6 812 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 NCCRP1Q6ZVX7 275 aaPredicted RBP16.41■□□□□ 0.22
SCLT1-208ENST00000506368 SAMD7Q7Z3H4 446 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 SETD3Q86TU7 594 aaPredicted RBP16.41■□□□□ 0.22
SCLT1-208ENST00000506368 TMEM35BQ8NCS4 154 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 ATP2A3Q93084 1043 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 SLC2A11Q9BYW1 496 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 OSBPL6Q9BZF3 934 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 VPS45Q9NRW7 570 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 DNAJC16Q9Y2G8 782 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 TCRBV7S3A2A0A539 114 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 ITM2AO43736 263 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 FBXO21O94952 628 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 HLA-DRAP01903 254 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 SERPINE1P05121 402 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 MAGEA6P43360 314 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 ALDH3B2P48448 385 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 SLC1A6P48664 564 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 ERFP50548 548 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 EIF3EP60228 445 aaKnown RBP16.41■□□□□ 0.22
SCLT1-208ENST00000506368 MBLAC2Q68D91 279 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 POTEHQ6S545 545 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 HPS6Q86YV9 775 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 IGDCC3Q8IVU1 814 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 SAMD3Q8N6K7 520 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 MCEEQ96PE7 176 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 PI4K2AQ9BTU6 479 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 NMRK2Q9NPI5 230 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 CYP26B1Q9NR63 512 aa16.41■□□□□ 0.22
SCLT1-208ENST00000506368 MYH9P35579 1960 aaKnown RBP16.4■□□□□ 0.22
SCLT1-208ENST00000506368 F8VP50 259 aa16.4■□□□□ 0.22
SCLT1-208ENST00000506368 EXTL3O43909 919 aa16.4■□□□□ 0.22
SCLT1-208ENST00000506368 CLASP2O75122 1294 aaKnown RBP16.4■□□□□ 0.22
SCLT1-208ENST00000506368 APOEP02649 317 aa16.4■□□□□ 0.22
SCLT1-208ENST00000506368 C4BPAP04003 597 aaKnown RBP16.4■□□□□ 0.22
SCLT1-208ENST00000506368 NLRP11P59045 1033 aaKnown RBP16.4■□□□□ 0.22
SCLT1-208ENST00000506368 TRPC3Q13507 836 aa16.4■□□□□ 0.22
SCLT1-208ENST00000506368 ACAP1Q15027 740 aa16.4■□□□□ 0.22
SCLT1-208ENST00000506368 CCDC92Q53HC0 331 aaPredicted RBP16.4■□□□□ 0.22
SCLT1-208ENST00000506368 CDC42EP5Q6NZY7 148 aa16.4■□□□□ 0.22
SCLT1-208ENST00000506368 TMEM270Q6UE05 265 aa16.4■□□□□ 0.22
SCLT1-208ENST00000506368 DENND5BQ6ZUT9 1274 aa16.4■□□□□ 0.22
SCLT1-208ENST00000506368 SIAH1Q8IUQ4 282 aa16.4■□□□□ 0.22
SCLT1-208ENST00000506368 NDUFAF2Q8N183 169 aa16.4■□□□□ 0.22
SCLT1-208ENST00000506368 AGBL3Q8NEM8 1001 aa16.4■□□□□ 0.22
SCLT1-208ENST00000506368 STON2Q8WXE9 905 aa16.4■□□□□ 0.22
SCLT1-208ENST00000506368 CCDC124Q96CT7 223 aaKnown RBP16.4■□□□□ 0.22
SCLT1-208ENST00000506368 APOL6Q9BWW8 343 aa16.4■□□□□ 0.22
SCLT1-208ENST00000506368 KMT5AQ9NQR1 393 aa16.4■□□□□ 0.22
SCLT1-208ENST00000506368 GPRC5DQ9NZD1 345 aa16.4■□□□□ 0.22
SCLT1-208ENST00000506368 ZC3H7BQ9UGR2 993 aaKnown RBP16.4■□□□□ 0.22
SCLT1-208ENST00000506368 RIMS3Q9UJD0 308 aa16.4■□□□□ 0.22
SCLT1-208ENST00000506368 GNEQ9Y223 722 aaKnown RBP16.4■□□□□ 0.22
SCLT1-208ENST00000506368 C8BP07358 591 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 COX4I1P13073 169 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 ATP6V1B1P15313 513 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 TCF4P15884 667 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 ZNF12P17014 697 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 KDELR1P24390 212 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 PCSK6P29122 969 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 ADSLP30566 484 aaPredicted RBP16.39■□□□□ 0.21
SCLT1-208ENST00000506368 CDH5P33151 784 aaPredicted RBP16.39■□□□□ 0.21
SCLT1-208ENST00000506368 STAT2P52630 851 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 MPP3Q13368 585 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 DPYSQ14117 519 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 INSCQ1MX18 579 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 TBC1D10BQ4KMP7 808 aaPredicted RBP16.39■□□□□ 0.21
SCLT1-208ENST00000506368 FASTKD1Q53R41 847 aaKnown RBP16.39■□□□□ 0.21
SCLT1-208ENST00000506368 TEDDM1Q5T9Z0 273 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 FAXCQ5TGI0 409 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 HM13Q8TCT9 377 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 SGF29Q96ES7 293 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 CNBD2Q96M20 576 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 SLC13A1Q9BZW2 595 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 RSAD1Q9HA92 442 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 RRAGCQ9HB90 399 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 RRN3Q9NYV6 651 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 IGSF9Q9P2J2 1179 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 SCAF8Q9UPN6 1271 aaKnown RBP16.39■□□□□ 0.21
SCLT1-208ENST00000506368 SIPA1L1O43166 1804 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 CCDC195A0A1B0GUA6 201 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 ZBED1O96006 694 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 RBP3P10745 1247 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 PSMC3P17980 439 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 OSBPP22059 807 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 PROZP22891 400 aa16.39■□□□□ 0.21
SCLT1-208ENST00000506368 EIF4BP23588 611 aaKnown RBP16.39■□□□□ 0.21
SCLT1-208ENST00000506368 POLR2BP30876 1174 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms