RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 MUM1Q2TAK8 710 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 GLRA4Q5JXX5 417 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 BSPRYQ5W0U4 402 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 ATG16L1Q676U5 607 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 KCNT2Q6UVM3 1135 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 TMEM110Q86TL2 294 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 SULF1Q8IWU6 871 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 DTX3LQ8TDB6 740 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 DEPDC1BQ8WUY9 529 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 SLC35F5Q8WV83 523 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 AFG1LQ8WV93 481 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 WDR60Q8WVS4 1066 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 TEKT4Q8WW24 435 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 DCPSQ96C86 337 aaKnown RBP7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 RILPQ96NA2 401 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 EBNA1BP2Q99848 306 aaKnown RBP7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 FRMD8Q9BZ67 464 aaPredicted RBP7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 C20orf27Q9GZN8 174 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 DPEP3Q9H4B8 488 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 PPARGC1AQ9UBK2 798 aaKnown RBP7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 ZNF180Q9UJW8 692 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 C2CD2Q9Y426 696 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 HES2Q9Y543 173 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 POLR2AP24928 1970 aaKnown RBP7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 DNAH12Q6ZR08 3092 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 HMX2A2RU54 273 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 B2RBV5 119 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 H3BRJ5 948 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 KLF11O14901 512 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 KRT36O76013 467 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 NEBLO76041 1014 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 LUC7L3O95232 432 aaKnown RBP7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 LMNAP02545 664 aaKnown RBP7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 ADORA2BP29275 332 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 PGM1P36871 562 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 IREB2P48200 963 aaKnown RBP7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 KIZQ2M2Z5 673 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 HSF5Q4G112 596 aaPredicted RBP7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 ACSBG2Q5FVE4 666 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 HEATR6Q6AI08 1181 aaKnown RBP7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 MTHFD1LQ6UB35 978 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 DENND5BQ6ZUT9 1274 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 ARMCX2Q7L311 632 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 SESTD1Q86VW0 696 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 PYROXD2Q8N2H3 581 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 TEX9Q8N6V9 391 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 FBXO27Q8NI29 283 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 GSDMBQ8TAX9 411 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 PPP1R13LQ8WUF5 828 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 C18orf25Q96B23 403 aaPredicted RBP7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 SIGLEC10Q96LC7 697 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 ZMAT2Q96NC0 199 aaKnown RBP7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 TBCBQ99426 244 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 ZNF670Q9BS34 389 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 SLC4A5Q9BY07 1137 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 TRIM6Q9C030 488 aaPredicted RBP7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 SNTG2Q9NY99 539 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 MFHAS1Q9Y4C4 1052 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 NME7Q9Y5B8 376 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 WDR27A2RRH5 827 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 A8MXQ7 604 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 DPYSL4O14531 572 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 CAPN9O14815 690 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 MDM4O15151 490 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 KIF1CO43896 1103 aaKnown RBP7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 GCATO75600 419 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 DDNO94850 711 aaPredicted RBP7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 NPTXRO95502 500 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 RARBP10826 455 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 CCDC130P13994 396 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 AMPD1P23109 780 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 ALDH18A1P54886 795 aaKnown RBP7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 POU5F1BQ06416 359 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 LAMC2Q13753 1193 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 KRT72Q14CN4 511 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 STILQ15468 1287 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 PKDCCQ504Y2 493 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 ZNF534Q76KX8 674 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 ERO1BQ86YB8 467 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 CDKL3Q8IVW4 592 aaPredicted RBP7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 TTC39CQ8N584 583 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 CCDC185Q8N715 623 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 PDCD7Q8N8D1 485 aaKnown RBP7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 SMC1BQ8NDV3 1235 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 PPP1R14CQ8TAE6 165 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 DNAJC9Q8WXX5 260 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 STMN2Q93045 179 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 LGMNQ99538 433 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 CEP41Q9BYV8 373 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 KCNK4Q9NYG8 393 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 SLC17A6Q9P2U8 582 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 TUBGCP4Q9UGJ1 667 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 AP4E1Q9UPM8 1137 aa7.88□□□□□ -1.15
PPARGC1A-204ENST00000506055 SYNJ2BP-COX16A0A087WUM0 186 aa7.87□□□□□ -1.15
PPARGC1A-204ENST00000506055 H3BRB1 525 aa7.87□□□□□ -1.15
PPARGC1A-204ENST00000506055 GOT1P17174 413 aa7.87□□□□□ -1.15
PPARGC1A-204ENST00000506055 ATP6V1C1P21283 382 aa7.87□□□□□ -1.15
PPARGC1A-204ENST00000506055 LMO2P25791 158 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms