RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 CYLDQ9NQC7 956 aa6.18□□□□□ -1.42
GYPB-205ENST00000505583 DNAJC17Q9NVM6 304 aaKnown RBP6.18□□□□□ -1.42
GYPB-205ENST00000505583 CACNA2D2Q9NY47 1150 aa6.18□□□□□ -1.42
GYPB-205ENST00000505583 PLK2Q9NYY3 685 aa6.18□□□□□ -1.42
GYPB-205ENST00000505583 SERTAD1Q9UHV2 236 aa6.18□□□□□ -1.42
GYPB-205ENST00000505583 CLEC4EQ9ULY5 219 aa6.18□□□□□ -1.42
GYPB-205ENST00000505583 PCDHA7Q9UN72 937 aa6.18□□□□□ -1.42
GYPB-205ENST00000505583 SLC6A14Q9UN76 642 aa6.18□□□□□ -1.42
GYPB-205ENST00000505583 CACNA1EQ15878 2313 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 ADAMTS20P59510 1910 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 CKAP5Q14008 2032 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 MUC22E2RYF6 1773 aaPredicted RBP6.17□□□□□ -1.42
GYPB-205ENST00000505583 PVALEFA0A1B0GWK0 134 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 A0A1W2PQH9 124 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 KCNJ18B7U540 433 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 K7ELQ4 463 aaPredicted RBP6.17□□□□□ -1.42
GYPB-205ENST00000505583 ARHGAP33O14559 1287 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 AP5Z1O43299 807 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 ACTN4O43707 911 aaKnown RBP6.17□□□□□ -1.42
GYPB-205ENST00000505583 SH3BP5O60239 455 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 GJB3O75712 270 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 STC2O76061 302 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 CLSTN1O94985 981 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 YEATS4O95619 227 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 ASS1P00966 412 aaKnown RBP6.17□□□□□ -1.42
GYPB-205ENST00000505583 SNRPFP62306 86 aaKnown RBP6.17□□□□□ -1.42
GYPB-205ENST00000505583 AMPD3Q01432 767 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 GFPT1Q06210 699 aaPredicted RBP6.17□□□□□ -1.42
GYPB-205ENST00000505583 RING1Q06587 406 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 GEN1Q17RS7 908 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 DUOXA1Q1HG43 343 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 KMT5BQ4FZB7 885 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 RESP18Q5W5W9 173 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 Q6ZNB5 142 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 SV2AQ7L0J3 742 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 PNPLA1Q8N8W4 532 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 TAS1R2Q8TE23 839 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 PAGE5Q96GU1 130 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 ZNF419Q96HQ0 510 aaPredicted RBP6.17□□□□□ -1.42
GYPB-205ENST00000505583 TNIP3Q96KP6 325 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 MKRN2Q9H000 416 aaKnown RBP6.17□□□□□ -1.42
GYPB-205ENST00000505583 NACA2Q9H009 215 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 IL21RQ9HBE5 538 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 TLR8Q9NR97 1041 aaKnown RBP6.17□□□□□ -1.42
GYPB-205ENST00000505583 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.17□□□□□ -1.42
GYPB-205ENST00000505583 COMMD8Q9NX08 183 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 MARK1Q9P0L2 795 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 KIAA1468Q9P260 1216 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 SCML2Q9UQR0 700 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 MSRB2Q9Y3D2 182 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 NEUROG3Q9Y4Z2 214 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 SLCO1B1Q9Y6L6 691 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 ATP8B3O60423 1300 aa6.17□□□□□ -1.42
GYPB-205ENST00000505583 TP53BP1Q12888 1972 aaPredicted RBP6.17□□□□□ -1.42
GYPB-205ENST00000505583 A0A1W2PQD8 194 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 UPK3BL1B0FP48 263 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 UPK3BL2E5RIL1 263 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 OPHN1O60890 802 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 HLA-DRAP01903 254 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 NR3C1P04150 777 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 TRIM49P0CI25 452 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 TRIM49CP0CI26 452 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 RARGP13631 454 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 ACO1P21399 889 aaKnown RBP6.16□□□□□ -1.42
GYPB-205ENST00000505583 HOXD12P35452 270 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 ATP5C1P36542 298 aaKnown RBP6.16□□□□□ -1.42
GYPB-205ENST00000505583 IL12RB1P42701 662 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 GCLMP48507 274 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 DGKGP49619 791 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 KIF11P52732 1056 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 AP3M2P53677 418 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 ATXN3P54252 364 aaPredicted RBP6.16□□□□□ -1.42
GYPB-205ENST00000505583 MFAP3P55082 362 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 BNC1Q01954 994 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 PPP3CAQ08209 521 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 INCA1Q0VD86 236 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 BYSLQ13895 437 aaKnown RBP6.16□□□□□ -1.42
GYPB-205ENST00000505583 SGSM1Q2NKQ1 1148 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 PLEKHG6Q3KR16 790 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 FUT11Q495W5 492 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 FYB2Q5VWT5 728 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 CEP135Q66GS9 1140 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 TMEM215Q68D42 235 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 KIAA1324Q6UXG2 1013 aaKnown RBP6.16□□□□□ -1.42
GYPB-205ENST00000505583 SLC36A4Q6YBV0 504 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 TRMT11Q7Z4G4 463 aaKnown RBP6.16□□□□□ -1.42
GYPB-205ENST00000505583 RAB44Q7Z6P3 723 aaPredicted RBP6.16□□□□□ -1.42
GYPB-205ENST00000505583 CACUL1Q86Y37 369 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 MARCH9Q86YJ5 346 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 SLC9A9Q8IVB4 645 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 RGL4Q8IZJ4 473 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 RBBP8NLQ8NC74 664 aaPredicted RBP6.16□□□□□ -1.42
GYPB-205ENST00000505583 TMEM174Q8WUU8 243 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 SORCS1Q8WY21 1168 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 CYFIP2Q96F07 1278 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 ZNF396Q96N95 335 aaPredicted RBP6.16□□□□□ -1.42
GYPB-205ENST00000505583 HNRNPABQ99729 332 aaKnown RBP6.16□□□□□ -1.42
GYPB-205ENST00000505583 BACH2Q9BYV9 841 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 FBXO44Q9H4M3 255 aa6.16□□□□□ -1.42
GYPB-205ENST00000505583 SLC32A1Q9H598 525 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms