RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 WDR24Q96S15 920 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 EIF3CQ99613 913 aaKnown RBP4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 AGO3Q9H9G7 860 aaKnown RBP4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 HAUS2Q9NVX0 235 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 PLA2G3Q9NZ20 509 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 CNOT7Q9UIV1 285 aaKnown RBP4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 VPS28Q9UK41 221 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 SUFUQ9UMX1 484 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 COL15A1P39059 1388 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 FAM90A20PA6NIJ5 464 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 KIF28PB7ZC32 967 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 MATN2O00339 956 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 TOR1BO14657 336 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 HNRNPRO43390 633 aaKnown RBP4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 ANP32CO43423 234 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 FOXS1O43638 330 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 DOK2O60496 412 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 CDC14BO60729 498 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 ACADMP11310 421 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 TNNT1P13805 278 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 HGFP14210 728 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 CD19P15391 556 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 CR2P20023 1033 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 PSMA4P25789 261 aaKnown RBP4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 UQCRC1P31930 480 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 RPS19P39019 145 aaKnown RBP4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 GSTM5P46439 218 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 RPP30P78346 268 aaKnown RBP4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 TBL3Q12788 808 aaKnown RBP4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 CUL4AQ13619 759 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 CAMK1Q14012 370 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 P3H1Q32P28 736 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 ARHGAP40Q5TG30 622 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 RHOT2Q8IXI1 618 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 GPR135Q8IZ08 494 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 LRRC71Q8N4P6 559 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 NEU4Q8WWR8 484 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 STAMQ92783 540 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 CUL5Q93034 780 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 APOPT1Q96IL0 206 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 ADOQ96SZ5 270 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 MPHOSPH9Q99550 1183 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 PAAF1Q9BRP4 392 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 GHITMQ9H3K2 345 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 CCDC134Q9H6E4 229 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 OAZ3Q9UMX2 235 aa4.3□□□□□ -1.72
TRAPPC13-208ENST00000505553 TSPAN4O14817 238 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 KIAA0355O15063 1070 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 TRIAP1O43715 76 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 KCNA2P16389 499 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 NTSR1P30989 418 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 ARL3P36405 182 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 RGS19P49795 217 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 CCT4P50991 539 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 ANXA11P50995 505 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 PDE6CP51160 858 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 TIAL1Q01085 375 aaKnown RBP eCLIP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 PDCLQ13371 301 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 MAMLD1Q13495 774 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 GRM7Q14831 915 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 SEC23BQ15437 767 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 DCAF17Q5H9S7 520 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 ZNF484Q5JVG2 852 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 LIPMQ5VYY2 423 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 IGFL4Q6B9Z1 124 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 RGS7BPQ6MZT1 257 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 MSANTD2Q6P1R3 559 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 CLEC9AQ6UXN8 241 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 ENOSF1Q7L5Y1 443 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 CLNKQ7Z7G1 428 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 CPLX4Q7Z7G2 160 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 DIS3L2Q8IYB7 885 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 SYNE4Q8N205 404 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 FAM71DQ8N9W8 422 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 MDGA1Q8NFP4 955 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 ZCCHC10Q8TBK6 192 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 ATRIPQ8WXE1 791 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 OVCA2Q8WZ82 227 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 REXO5Q96IC2 774 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 ZBTB45Q96K62 511 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 TTC14Q96N46 770 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 FUZQ9BT04 418 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 CENPOQ9BU64 300 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 AP1M1Q9BXS5 423 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 SMOC2Q9H3U7 446 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 EIF2B3Q9NR50 452 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 CTTNBP2NLQ9P2B4 639 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 STEAP1Q9UHE8 339 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 HSF4Q9ULV5 492 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 ZBTB1Q9Y2K1 713 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 SLC27A6Q9Y2P4 619 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 GDAQ9Y2T3 454 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 RSF1Q96T23 1441 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 SLC38A8A6NNN8 435 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 F5H697 171 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 GTPBP1O00178 669 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 AHCYL1O43865 530 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 TULP3O75386 442 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 ERN1O75460 977 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 URI1O94763 535 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms