RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 FAM172AQ8WUF8 416 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 MYOZ2Q9NPC6 264 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 MAD1L1Q9Y6D9 718 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 MAFO75444 373 aaPredicted RBP12.3□□□□□ -0.44
UBE3D-206ENST00000505226 PRKCGP05129 697 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 PRKCBP05771 671 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 NFICP08651 508 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 FGF3P11487 239 aaPredicted RBP12.3□□□□□ -0.44
UBE3D-206ENST00000505226 PDGFRAP16234 1089 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 HMGCS2P54868 508 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 RPL10AP62906 217 aaKnown RBP12.3□□□□□ -0.44
UBE3D-206ENST00000505226 SLC10A2Q12908 348 aaPredicted RBP12.3□□□□□ -0.44
UBE3D-206ENST00000505226 VWA5B1Q5TIE3 1220 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 PDSS2Q86YH6 399 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 GPAMQ9HCL2 828 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 PTPRHQ9HD43 1115 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 ASNSD1Q9NWL6 643 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 SOX13Q9UN79 622 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 DNAJC16Q9Y2G8 782 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 F5H423 210 aaPredicted RBP12.3□□□□□ -0.44
UBE3D-206ENST00000505226 ADCY6O43306 1168 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 MED7O43513 233 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 ETS2P15036 469 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 UBA1P22314 1058 aaKnown RBP12.3□□□□□ -0.44
UBE3D-206ENST00000505226 L1CAMP32004 1257 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 MAGEA6P43360 314 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 RPS6KA3P51812 740 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 CRADDP78560 199 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 HNRNPDQ14103 355 aaKnown RBP12.3□□□□□ -0.44
UBE3D-206ENST00000505226 CCDC14Q49A88 953 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 FAM183BPQ6ZVS7 135 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 TRIM42Q8IWZ5 723 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 CXorf38Q8TB03 319 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 SPATA16Q9BXB7 569 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 THAP1Q9NVV9 213 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 PIH1D1Q9NWS0 290 aaKnown RBP12.3□□□□□ -0.44
UBE3D-206ENST00000505226 CPSF2Q9P2I0 782 aaKnown RBP12.3□□□□□ -0.44
UBE3D-206ENST00000505226 DNAJB4Q9UDY4 337 aa12.3□□□□□ -0.44
UBE3D-206ENST00000505226 APBA3O96018 575 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 ALDOAP04075 364 aaKnown RBP12.29□□□□□ -0.44
UBE3D-206ENST00000505226 IQCF3P0C7M6 154 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 SPATA31D3P0C874 917 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 TFE3P19532 575 aaPredicted RBP12.29□□□□□ -0.44
UBE3D-206ENST00000505226 GPD1P21695 349 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 PROZP22891 400 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 SCYL2Q6P3W7 929 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 SPATA31D4Q6ZUB0 917 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 RSPH3Q86UC2 560 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 TRIM50Q86XT4 487 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 CNPY3Q9BT09 278 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 FAM192AQ9GZU8 254 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 OCEL1Q9H607 264 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 PNPOQ9NVS9 261 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.29□□□□□ -0.44
UBE3D-206ENST00000505226 ARHGAP42A6NI28 874 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 ZBTB42B2RXF5 422 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 BIRC5O15392 142 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 B4GALT4O60513 344 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 SIN3BO75182 1162 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 CILPO75339 1184 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 KRT38O76015 456 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 FARP2O94887 1054 aaPredicted RBP12.29□□□□□ -0.44
UBE3D-206ENST00000505226 PFKMP08237 780 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 EPHB1P54762 984 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 AQP4P55087 323 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 CDK18Q07002 472 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 DLG1Q12959 904 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 FAM47CQ5HY64 1035 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 NBPF12Q5TAG4 269 aaPredicted RBP12.29□□□□□ -0.44
UBE3D-206ENST00000505226 DHDDSQ86SQ9 333 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 TMEM176AQ96HP8 235 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 SORT1Q99523 831 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 EBNA1BP2Q99848 306 aaKnown RBP12.29□□□□□ -0.44
UBE3D-206ENST00000505226 PCDH18Q9HCL0 1135 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 ZMPSTE24O75844 475 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 ZBED1O96006 694 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 PROCP04070 461 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 PEX2P28328 305 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 CDK7P50613 346 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 STAT5BP51692 787 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 BCAR1P56945 870 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 TFDP2Q14188 446 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 HIC1Q14526 733 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 ACAP1Q15027 740 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 LIN52Q52LA3 116 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 ZNF667Q5HYK9 610 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 EFHC1Q5JVL4 640 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 LGSNQ5TDP6 509 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 PRAMEF18Q5VWM3 479 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 PGM2L1Q6PCE3 622 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 HIPK4Q8NE63 616 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 AGBL3Q8NEM8 1001 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 OR6Y1Q8NGX8 325 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 GSDMBQ8TAX9 411 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.29□□□□□ -0.44
UBE3D-206ENST00000505226 PPP2R3CQ969Q6 453 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 CCDC124Q96CT7 223 aaKnown RBP12.29□□□□□ -0.44
UBE3D-206ENST00000505226 GORASP1Q9BQQ3 440 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 MINDY3Q9H8M7 445 aa12.29□□□□□ -0.44
UBE3D-206ENST00000505226 BCLAF3A2AJT9 711 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms