RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 ARSHQ5FYA8 562 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 TDRD10Q5VZ19 366 aaKnown RBP6.38□□□□□ -1.39
GYPB-204ENST00000504951 GRAMD4Q6IC98 578 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 DHRS13Q6UX07 377 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 ERICH1Q86X53 443 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 TMEM25Q86YD3 366 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 SPACA3Q8IXA5 215 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 ZCCHC9Q8N567 271 aaKnown RBP6.38□□□□□ -1.39
GYPB-204ENST00000504951 DCBLD1Q8N8Z6 715 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 FAM181AQ8N9Y4 354 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 ZNF248Q8NDW4 579 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 STKLD1Q8NE28 680 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 MYCBPAPQ8TBZ2 947 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 BICD1Q96G01 975 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 FIZ1Q96SL8 496 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 ACOX2Q99424 681 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 GPR174Q9BXC1 333 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 GMIPQ9P107 970 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 CFAP97Q9P2B7 532 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 THAP10Q9P2Z0 257 aaPredicted RBP6.38□□□□□ -1.39
GYPB-204ENST00000504951 IL17BQ9UHF5 180 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 ITGA11Q9UKX5 1188 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 TPX2Q9ULW0 747 aaKnown RBP6.38□□□□□ -1.39
GYPB-204ENST00000504951 NOL7Q9UMY1 257 aaKnown RBP6.38□□□□□ -1.39
GYPB-204ENST00000504951 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.38□□□□□ -1.39
GYPB-204ENST00000504951 ANKRD6Q9Y2G4 727 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 MUC22E2RYF6 1773 aaPredicted RBP6.38□□□□□ -1.39
GYPB-204ENST00000504951 TCHHQ07283 1943 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 PIEZO2Q9H5I5 2752 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 AHCTF1Q8WYP5 2266 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 NBPF19A0A087WUL8 3843 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 A0A1B0GVT2 93 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 KCNJ18B7U540 433 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 TISP43B9A030 160 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 PRRT4C9JH25 899 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 ENC1O14682 589 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 LZTS3O60299 673 aaPredicted RBP6.37□□□□□ -1.39
GYPB-204ENST00000504951 TSPAN3O60637 253 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 TACC1O75410 805 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 RFPL3O75679 317 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 LDHAP00338 332 aaKnown RBP6.37□□□□□ -1.39
GYPB-204ENST00000504951 WARSP23381 471 aaKnown RBP6.37□□□□□ -1.39
GYPB-204ENST00000504951 CD27P26842 260 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 GRIK1P39086 918 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 RXRGP48443 463 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 CSNK1EP49674 416 aaKnown RBP6.37□□□□□ -1.39
GYPB-204ENST00000504951 ACADVLP49748 655 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 ACOT2P49753 483 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 ERVPABLB-1P60509 514 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 HMGN5P82970 282 aaKnown RBP6.37□□□□□ -1.39
GYPB-204ENST00000504951 RBP5P82980 135 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 E2F1Q01094 437 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 KDSRQ06136 332 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 TAF10Q12962 218 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 TARDBPQ13148 414 aaKnown RBP eCLIP6.37□□□□□ -1.39
GYPB-204ENST00000504951 SERINC3Q13530 473 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 STARD3Q14849 445 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 SOWAHAQ2M3V2 549 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 FUT11Q495W5 492 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 HECTD3Q5T447 861 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 BROXQ5VW32 411 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 SCARA3Q6AZY7 606 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 ADALQ6DHV7 355 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 KLHDC10Q6PID8 442 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 DTHD1Q6ZMT9 781 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 OSTM1Q86WC4 334 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 MARCH9Q86YJ5 346 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 TMPRSS6Q8IU80 811 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 SCN4BQ8IWT1 228 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 C1orf127Q8N9H9 656 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 FAM184AQ8NB25 1140 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 RBBP8NLQ8NC74 664 aaPredicted RBP6.37□□□□□ -1.39
GYPB-204ENST00000504951 SCFD1Q8WVM8 642 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 HVCN1Q96D96 273 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 SIPA1Q96FS4 1042 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 ORAI3Q9BRQ5 295 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 STRA6Q9BX79 667 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 MKRN2Q9H000 416 aaKnown RBP6.37□□□□□ -1.39
GYPB-204ENST00000504951 IKZF4Q9H2S9 585 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 ERVMER34-1Q9H9K5 563 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 FBRSQ9HAH7 460 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 PARVGQ9HBI0 331 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 CRTAC1Q9NQ79 661 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.37□□□□□ -1.392e-23■■■■■ 397.5
GYPB-204ENST00000504951 FTSJ1Q9UET6 329 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 EIF2B4Q9UI10 523 aaKnown RBP6.37□□□□□ -1.39
GYPB-204ENST00000504951 DNMT3LQ9UJW3 386 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 AGO2Q9UKV8 859 aaKnown RBP6.37□□□□□ -1.39
GYPB-204ENST00000504951 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.37□□□□□ -1.39
GYPB-204ENST00000504951 SNX11Q9Y5W9 270 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 AK5Q9Y6K8 562 aa6.37□□□□□ -1.39
GYPB-204ENST00000504951 VWA3AA6NCI4 1184 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 ANKRD63C9JTQ0 380 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 VILLO15195 856 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 COCHO43405 550 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 TRAK2O60296 914 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 LDOC1O95751 146 aaPredicted RBP6.36□□□□□ -1.39
GYPB-204ENST00000504951 PLA2G4BP0C869 781 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 MBL2P11226 248 aaPredicted RBP6.36□□□□□ -1.39
GYPB-204ENST00000504951 TYRP14679 529 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms