RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 CDK15Q96Q40 435 aa8.42□□□□□ -1.06
RFC1-207ENST00000504554 ULBP1Q9BZM6 244 aa8.42□□□□□ -1.06
RFC1-207ENST00000504554 UBXN6Q9BZV1 441 aa8.42□□□□□ -1.06
RFC1-207ENST00000504554 FBXO44Q9H4M3 255 aa8.42□□□□□ -1.06
RFC1-207ENST00000504554 SIX2Q9NPC8 291 aa8.42□□□□□ -1.06
RFC1-207ENST00000504554 CYLDQ9NQC7 956 aa8.42□□□□□ -1.06
RFC1-207ENST00000504554 CNTN6Q9UQ52 1028 aa8.42□□□□□ -1.06
RFC1-207ENST00000504554 F5P12259 2224 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 PRR23AA6NEV1 266 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 PIK3R2O00459 728 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 XPO1O14980 1071 aaKnown RBP8.41□□□□□ -1.06
RFC1-207ENST00000504554 TRIM24O15164 1050 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 NCAM2O15394 837 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 PNMA6AP0CW24 399 aaPredicted RBP8.41□□□□□ -1.06
RFC1-207ENST00000504554 CCDC192P0DO97 292 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 VDRP11473 427 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 PON1P27169 355 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 RGS7P49802 495 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 PDE6CP51160 858 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 TKTL1P51854 596 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 GCNT1Q02742 428 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 BST2Q10589 180 aaKnown RBP8.41□□□□□ -1.06
RFC1-207ENST00000504554 SGO2Q562F6 1265 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 PM20D1Q6GTS8 502 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 PMF1Q6P1K2 205 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 TRIM65Q6PJ69 517 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 C11orf57Q6ZUT1 292 aaPredicted RBP8.41□□□□□ -1.06
RFC1-207ENST00000504554 CPA6Q8N4T0 437 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 TTC39CQ8N584 583 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 CLEC4CQ8WTT0 213 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 SLC35F5Q8WV83 523 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 SECISBP2LQ93073 1101 aaKnown RBP8.41□□□□□ -1.06
RFC1-207ENST00000504554 P2RY13Q9BPV8 354 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 IRF2BPLQ9H1B7 796 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 THAP9Q9H5L6 903 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 FAM124BQ9H5Z6 455 aaPredicted RBP8.41□□□□□ -1.06
RFC1-207ENST00000504554 UBE2TQ9NPD8 197 aaPredicted RBP8.41□□□□□ -1.06
RFC1-207ENST00000504554 TLR8Q9NR97 1041 aaKnown RBP8.41□□□□□ -1.06
RFC1-207ENST00000504554 CYTH4Q9UIA0 394 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 NAGPAQ9UK23 515 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 FBXO4Q9UKT5 387 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 CDV3Q9UKY7 258 aaKnown RBP8.41□□□□□ -1.06
RFC1-207ENST00000504554 ZMIZ1Q9ULJ6 1067 aa8.41□□□□□ -1.06
RFC1-207ENST00000504554 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.41□□□□□ -1.06
RFC1-207ENST00000504554 PATJQ8NI35 1801 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 E2F8A0AVK6 867 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 YJEFN3A6XGL0 299 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 E7ENQ6 273 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 K7EQS6 105 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 LILRB5O75023 590 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 NFATC1O95644 943 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 FGFR1OPO95684 399 aaKnown RBP8.4□□□□□ -1.06
RFC1-207ENST00000504554 KLKB1P03952 638 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 PAEPP09466 180 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 ERCC5P28715 1186 aaPredicted RBP8.4□□□□□ -1.06
RFC1-207ENST00000504554 ATP5C1P36542 298 aaKnown RBP8.4□□□□□ -1.06
RFC1-207ENST00000504554 MTIF2P46199 727 aaKnown RBP8.4□□□□□ -1.06
RFC1-207ENST00000504554 PLA2G4AP47712 749 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 BCAT1P54687 386 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 YWHAEP62258 255 aaKnown RBP8.4□□□□□ -1.06
RFC1-207ENST00000504554 ADIGQ0VDE8 80 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 KCNMA1Q12791 1236 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 GRSF1Q12849 480 aaKnown RBP eCLIP8.4□□□□□ -1.06
RFC1-207ENST00000504554 SRSF5Q13243 272 aaKnown RBP8.4□□□□□ -1.06
RFC1-207ENST00000504554 LRRC32Q14392 662 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 CNGA2Q16280 664 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 ZNF528Q3MIS6 628 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 DGKKQ5KSL6 1271 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 C10orf120Q5SQS8 335 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 LY6G5CQ5SRR4 150 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 DENND1BQ6P3S1 775 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 HTR3DQ70Z44 454 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 TMEM25Q86YD3 366 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 MIB1Q86YT6 1006 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 DEPDC4Q8N2C3 294 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 SPEM1Q8N4L4 309 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 ZBTB44Q8NCP5 570 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 CD101Q93033 1021 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 GBP4Q96PP9 640 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 CLIC5Q9NZA1 410 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 TJP2Q9UDY2 1190 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 HCN2Q9UL51 889 aa8.4□□□□□ -1.06
RFC1-207ENST00000504554 ZNF638Q14966 1978 aaKnown RBP8.4□□□□□ -1.06
RFC1-207ENST00000504554 CACNA1IQ9P0X4 2223 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 CHURC1-FNTBB4DL54 471 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 M0QYV0 167 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 STC2O76061 302 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 PAPSS2O95340 614 aaPredicted RBP8.39□□□□□ -1.07
RFC1-207ENST00000504554 ZBED1O96006 694 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 HMBSP08397 361 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 ADH5P11766 374 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 KRT5P13647 590 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 LCP1P13796 627 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 HNRNPLP14866 589 aaKnown RBP eCLIP8.39□□□□□ -1.07
RFC1-207ENST00000504554 TRIM21P19474 475 aaKnown RBP8.39□□□□□ -1.07
RFC1-207ENST00000504554 GPD2P43304 727 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 CXCL12P48061 93 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 PXNP49023 591 aaPredicted RBP8.39□□□□□ -1.07
RFC1-207ENST00000504554 RPL34P49207 117 aaKnown RBP8.39□□□□□ -1.07
RFC1-207ENST00000504554 FNTBP49356 437 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms