RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 CHRNB2P17787 502 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 ITIH1P19827 911 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 RRM2P31350 389 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 ETV4P43268 484 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 SLC26A2P50443 739 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 COPAP53621 1224 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 SRP54P61011 504 aaKnown RBP6.16□□□□□ -1.42
LINC01340-201ENST00000504012 PHC1P78364 1004 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 FOXO4P98177 505 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 KRT17Q04695 432 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 KCNH2Q12809 1159 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 PTP4A2Q12974 167 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 KRR1Q13601 381 aaKnown RBP6.16□□□□□ -1.42
LINC01340-201ENST00000504012 SIM2Q14190 667 aaPredicted RBP6.16□□□□□ -1.42
LINC01340-201ENST00000504012 PDIA6Q15084 440 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 PFKFB3Q16875 520 aaPredicted RBP6.16□□□□□ -1.42
LINC01340-201ENST00000504012 PLA2G4EQ3MJ16 856 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 C5orf22Q49AR2 442 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 TRAPPC3LQ5T215 181 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 KRT80Q6KB66 452 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 FAM117BQ6P1L5 589 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 SYCE2Q6PIF2 218 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 RNF207Q6ZRF8 634 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 TAS2R42Q7RTR8 314 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 DGLUCYQ7Z3D6 616 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 SETD3Q86TU7 594 aaPredicted RBP6.16□□□□□ -1.42
LINC01340-201ENST00000504012 PRPF39Q86UA1 669 aaKnown RBP6.16□□□□□ -1.42
LINC01340-201ENST00000504012 CCDC28AQ8IWP9 274 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 BRSK2Q8IWQ3 736 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 SLC38A6Q8IZM9 456 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 ZDHHC14Q8IZN3 488 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 BLIDQ8IZY5 108 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 SLC15A4Q8N697 577 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 ARL6IP6Q8N6S5 226 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 POU5F2Q8N7G0 328 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 LINC00469Q8N7U9 141 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 ASCC1Q8N9N2 400 aaKnown RBP6.16□□□□□ -1.42
LINC01340-201ENST00000504012 SNX31Q8N9S9 440 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 SLC4A11Q8NBS3 891 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 FLAD1Q8NFF5 587 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 GSDMBQ8TAX9 411 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 KBTBD7Q8WVZ9 684 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 STON2Q8WXE9 905 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 KRT35Q92764 455 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 TP53INP1Q96A56 240 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 ACDQ96AP0 544 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 ZUFSPQ96AP4 578 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 TMIGD2Q96BF3 282 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 REXO5Q96IC2 774 aaKnown RBP6.16□□□□□ -1.42
LINC01340-201ENST00000504012 APOPT1Q96IL0 206 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 SPATA17Q96L03 361 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 COG8Q96MW5 612 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 MYL10Q9BUA6 226 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 NUP85Q9BW27 656 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 ANKRD60Q9BZ19 345 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 ZC3H12CQ9C0D7 883 aaKnown RBP6.16□□□□□ -1.42
LINC01340-201ENST00000504012 FANCEQ9HB96 536 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 LGR6Q9HBX8 967 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 FBXO6Q9NRD1 293 aaPredicted RBP6.16□□□□□ -1.42
LINC01340-201ENST00000504012 AASDHPPTQ9NRN7 309 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.16□□□□□ -1.42
LINC01340-201ENST00000504012 MCM9Q9NXL9 1143 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 PPARGC1AQ9UBK2 798 aaKnown RBP6.16□□□□□ -1.42
LINC01340-201ENST00000504012 ASIC3Q9UHC3 531 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 TBK1Q9UHD2 729 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 PGAP2Q9UHJ9 254 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 IPO11Q9UI26 975 aaKnown RBP6.16□□□□□ -1.42
LINC01340-201ENST00000504012 CDH22Q9UJ99 828 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 NUP50Q9UKX7 468 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 EIF3LQ9Y262 564 aaKnown RBP6.16□□□□□ -1.42
LINC01340-201ENST00000504012 TRAF6Q9Y4K3 522 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 MRPL42Q9Y6G3 142 aaKnown RBP6.16□□□□□ -1.42
LINC01340-201ENST00000504012 V9GY48 417 aaPredicted RBP6.16□□□□□ -1.42
LINC01340-201ENST00000504012 UBE4BO95155 1302 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 USP54Q70EL1 1684 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 RIMS1Q86UR5 1692 aaKnown RBP6.16□□□□□ -1.42
LINC01340-201ENST00000504012 TOPAZ1Q8N9V7 1692 aa6.16□□□□□ -1.42
LINC01340-201ENST00000504012 A0A1W2PQ67 120 aa6.15□□□□□ -1.42
LINC01340-201ENST00000504012 ARHGEF37A1IGU5 675 aa6.15□□□□□ -1.42
LINC01340-201ENST00000504012 ZSCAN5BA6NJL1 495 aa6.15□□□□□ -1.42
LINC01340-201ENST00000504012 I3L4J1 428 aa6.15□□□□□ -1.42
LINC01340-201ENST00000504012 M0R2N6 131 aa6.15□□□□□ -1.42
LINC01340-201ENST00000504012 TRAF5O00463 557 aa6.15□□□□□ -1.42
LINC01340-201ENST00000504012 ATP2A1O14983 1001 aa6.15□□□□□ -1.42
LINC01340-201ENST00000504012 NKRFO15226 690 aaKnown RBP eCLIP6.15□□□□□ -1.42
LINC01340-201ENST00000504012 SLC22A2O15244 555 aa6.15□□□□□ -1.42
LINC01340-201ENST00000504012 SLC16A3O15427 465 aaKnown RBP6.15□□□□□ -1.42
LINC01340-201ENST00000504012 KCNJ13O60928 360 aa6.15□□□□□ -1.42
LINC01340-201ENST00000504012 TMCC2O75069 709 aa6.15□□□□□ -1.42
LINC01340-201ENST00000504012 DEAF1O75398 565 aaPredicted RBP6.15□□□□□ -1.42
LINC01340-201ENST00000504012 ATE1O95260 518 aa6.15□□□□□ -1.42
LINC01340-201ENST00000504012 STAMBPO95630 424 aa6.15□□□□□ -1.42
LINC01340-201ENST00000504012 BCL10O95999 233 aa6.15□□□□□ -1.42
LINC01340-201ENST00000504012 ZNF26P17031 533 aaPredicted RBP6.15□□□□□ -1.42
LINC01340-201ENST00000504012 CCNA2P20248 432 aa6.15□□□□□ -1.42
LINC01340-201ENST00000504012 IMPDH1P20839 514 aa6.15□□□□□ -1.42
LINC01340-201ENST00000504012 CD9P21926 228 aa6.15□□□□□ -1.42
LINC01340-201ENST00000504012 PROZP22891 400 aa6.15□□□□□ -1.42
LINC01340-201ENST00000504012 CES1P23141 567 aa6.15□□□□□ -1.42
LINC01340-201ENST00000504012 CFL1P23528 166 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms