RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 FBXO10Q9UK96 956 aa16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 SLC27A6Q9Y2P4 619 aa16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 SLCO1B1Q9Y6L6 691 aa16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 NUMA1Q14980 2115 aa16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 FAM92AA1XBS5 289 aa16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 ZNF233A6NK53 670 aa16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 ENC1O14682 589 aa16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 KIAA0391O15091 583 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 PAPSS1O43252 624 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 RFPL3O75679 317 aa16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 C1SP09871 688 aa16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 ACO1P21399 889 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 ATP5C1P36542 298 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 LONP1P36776 959 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 COPAP53621 1224 aa16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 CXADRP78310 365 aa16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 TARDBPQ13148 414 aaKnown RBP eCLIP16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 PCSK4Q6UW60 755 aa16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 ADAT2Q7Z6V5 191 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 CACUL1Q86Y37 369 aa16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 FGF11Q92914 225 aa16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 DMAP1Q9NPF5 467 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 TLR8Q9NR97 1041 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-210ENST00000503827 ARHGAP6O43182 974 aa16.69■□□□□ 0.26
PDLIM7-210ENST00000503827 IL9RQ01113 521 aa16.69■□□□□ 0.26
PDLIM7-210ENST00000503827 ALCAMQ13740 583 aa16.69■□□□□ 0.26
PDLIM7-210ENST00000503827 WDR72Q3MJ13 1102 aa16.69■□□□□ 0.26
PDLIM7-210ENST00000503827 TRAPPC11Q7Z392 1133 aa16.69■□□□□ 0.26
PDLIM7-210ENST00000503827 FAM35AQ86V20 835 aa16.69■□□□□ 0.26
PDLIM7-210ENST00000503827 WDR49Q8IV35 697 aa16.69■□□□□ 0.26
PDLIM7-210ENST00000503827 TMEM176AQ96HP8 235 aa16.69■□□□□ 0.26
PDLIM7-210ENST00000503827 FBXO44Q9H4M3 255 aa16.69■□□□□ 0.26
PDLIM7-210ENST00000503827 C6orf106Q9H6K1 298 aaPredicted RBP16.69■□□□□ 0.26
PDLIM7-210ENST00000503827 DNMT3LQ9UJW3 386 aa16.69■□□□□ 0.26
PDLIM7-210ENST00000503827 KIF3AQ9Y496 699 aa16.69■□□□□ 0.26
PDLIM7-210ENST00000503827 COL6A6A6NMZ7 2263 aa16.69■□□□□ 0.26
PDLIM7-210ENST00000503827 LDOC1O95751 146 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-210ENST00000503827 TBX18O95935 607 aa16.68■□□□□ 0.26
PDLIM7-210ENST00000503827 CST3P01034 146 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-210ENST00000503827 EPHX1P07099 455 aa16.68■□□□□ 0.26
PDLIM7-210ENST00000503827 ACTN2P35609 894 aa16.68■□□□□ 0.26
PDLIM7-210ENST00000503827 CTSKP43235 329 aa16.68■□□□□ 0.26
PDLIM7-210ENST00000503827 CASP5P51878 434 aa16.68■□□□□ 0.26
PDLIM7-210ENST00000503827 MFAP3P55082 362 aa16.68■□□□□ 0.26
PDLIM7-210ENST00000503827 CLDN6P56747 220 aa16.68■□□□□ 0.26
PDLIM7-210ENST00000503827 TLE3Q04726 772 aa16.68■□□□□ 0.26
PDLIM7-210ENST00000503827 ZNF234Q14588 700 aa16.68■□□□□ 0.26
PDLIM7-210ENST00000503827 GEN1Q17RS7 908 aa16.68■□□□□ 0.26
PDLIM7-210ENST00000503827 SMARCD1Q96GM5 515 aa16.68■□□□□ 0.26
PDLIM7-210ENST00000503827 CNDP2Q96KP4 475 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-210ENST00000503827 OLFML3Q9NRN5 406 aa16.68■□□□□ 0.26
PDLIM7-210ENST00000503827 PLXNA2O75051 1894 aa16.67■□□□□ 0.26
PDLIM7-210ENST00000503827 CD27P26842 260 aa16.67■□□□□ 0.26
PDLIM7-210ENST00000503827 ACSL1P33121 698 aa16.67■□□□□ 0.26
PDLIM7-210ENST00000503827 KCNC4Q03721 635 aa16.67■□□□□ 0.26
PDLIM7-210ENST00000503827 CCDC173Q0VFZ6 552 aa16.67■□□□□ 0.26
PDLIM7-210ENST00000503827 HES3Q5TGS1 186 aa16.67■□□□□ 0.26
PDLIM7-210ENST00000503827 LAYNQ6UX15 382 aa16.67■□□□□ 0.26
PDLIM7-210ENST00000503827 OR2T3Q8NH03 318 aa16.67■□□□□ 0.26
PDLIM7-210ENST00000503827 BIRC7Q96CA5 298 aa16.67■□□□□ 0.26
PDLIM7-210ENST00000503827 WBP1Q96G27 269 aa16.67■□□□□ 0.26
PDLIM7-210ENST00000503827 LHX5Q9H2C1 402 aa16.67■□□□□ 0.26
PDLIM7-210ENST00000503827 CYLDQ9NQC7 956 aa16.67■□□□□ 0.26
PDLIM7-210ENST00000503827 ELOVL2Q9NXB9 296 aa16.67■□□□□ 0.26
PDLIM7-210ENST00000503827 A0A1B0GTQ1 180 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 AP1G2O75843 785 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 FSBPO95073 299 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 SEMA4FO95754 770 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 PENKP01210 267 aaPredicted RBP16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 TNNI1P19237 187 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 PRKCHP24723 683 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 PLA2G4AP47712 749 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 PGFP49763 221 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 C21orf59P57076 290 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 RHDQ02161 417 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 ARID5AQ03989 594 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 GRIN1Q05586 938 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 DNAJC3Q13217 504 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 EIF4HQ15056 248 aaKnown RBP16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 SERPINA13PQ6UXR4 307 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 PAQR9Q6ZVX9 377 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 USP49Q70CQ1 688 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 ANKS1BQ7Z6G8 1248 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 GATAD2AQ86YP4 633 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 CBWD2Q8IUF1 395 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 SPACA3Q8IXA5 215 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 DNAJC19Q96DA6 116 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 TNIP3Q96KP6 325 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 ARID3AQ99856 593 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 BTBD1Q9H0C5 482 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 KIAA1586Q9HCI6 787 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 NXF1Q9UBU9 619 aaKnown RBP16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 STK17AQ9UEE5 414 aa16.66■□□□□ 0.26
PDLIM7-210ENST00000503827 B8ZZF3 427 aa16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 CBX4O00257 560 aa16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 BRINP1O60477 761 aa16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 TSPAN3O60637 253 aa16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 BMP15O95972 392 aa16.65■□□□□ 0.26
PDLIM7-210ENST00000503827 ITGAVP06756 1048 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms