RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 NCAM1P13591 858 aa15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 RARGP13631 454 aa15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 DLG4P78352 724 aa15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 CLDN10P78369 228 aa15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 GOLGA8FQ08AF8 430 aa15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 GOLGA8DPQ0D2H9 430 aa15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 KNOP1Q1ED39 458 aaKnown RBP15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 SOWAHCQ53LP3 525 aaPredicted RBP15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 SPOPLQ6IQ16 392 aa15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 SHC4Q6S5L8 630 aa15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 CLEC20AQ6ZU45 233 aa15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 METTL3Q86U44 580 aaKnown RBP15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 ZCCHC9Q8N567 271 aaKnown RBP15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 IQUBQ8NA54 791 aa15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 MDM1Q8TC05 714 aa15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 ZDHHC5Q9C0B5 715 aa15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 MIR1-1HGQ9H1L0 117 aa15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 CCDC86Q9H6F5 360 aaKnown RBP15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 ITM2CQ9NQX7 267 aa15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 USP36Q9P275 1121 aaKnown RBP15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 CGNQ9P2M7 1197 aaKnown RBP15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 PCOLCE2Q9UKZ9 415 aa15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 APOBEC2Q9Y235 224 aaKnown RBP15.44■□□□□ 0.06
SEC61A1-207ENST00000498837 MYLKQ15746 1914 aa15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 STC2O76061 302 aa15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 KLKB1P03952 638 aa15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 ACO1P21399 889 aaKnown RBP15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 IL12RB1P42701 662 aa15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 PLA2G4AP47712 749 aa15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 AP3M2P53677 418 aa15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 BNC1Q01954 994 aa15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 GEN1Q17RS7 908 aa15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 C10orf120Q5SQS8 335 aa15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 DCAF12L1Q5VU92 463 aa15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 GLRX5Q86SX6 157 aa15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 PDZD3Q86UT5 571 aa15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 SETD7Q8WTS6 366 aaKnown RBP15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 TWNKQ96RR1 684 aa15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 ZSCAN16Q9H4T2 348 aaPredicted RBP15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 GAREM1Q9H706 876 aa15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 FOXD4L1Q9NU39 408 aa15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 THAP10Q9P2Z0 257 aaPredicted RBP15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 DNMT3LQ9UJW3 386 aa15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 SMG1Q96Q15 3661 aaKnown RBP15.43■□□□□ 0.06
SEC61A1-207ENST00000498837 PLXNA2O75051 1894 aa15.42■□□□□ 0.06
SEC61A1-207ENST00000498837 POLR2DO15514 142 aaKnown RBP15.42■□□□□ 0.06
SEC61A1-207ENST00000498837 PPP6R2O75170 966 aa15.42■□□□□ 0.06
SEC61A1-207ENST00000498837 FAM200BP0CF97 657 aa15.42■□□□□ 0.06
SEC61A1-207ENST00000498837 TPMTP51580 245 aa15.42■□□□□ 0.06
SEC61A1-207ENST00000498837 CUL4BQ13620 913 aa15.42■□□□□ 0.06
SEC61A1-207ENST00000498837 STARD3Q14849 445 aa15.42■□□□□ 0.06
SEC61A1-207ENST00000498837 SGSM1Q2NKQ1 1148 aa15.42■□□□□ 0.06
SEC61A1-207ENST00000498837 KLHDC10Q6PID8 442 aa15.42■□□□□ 0.06
SEC61A1-207ENST00000498837 SCD5Q86SK9 330 aa15.42■□□□□ 0.06
SEC61A1-207ENST00000498837 UNC93AQ86WB7 457 aa15.42■□□□□ 0.06
SEC61A1-207ENST00000498837 TMPRSS6Q8IU80 811 aa15.42■□□□□ 0.06
SEC61A1-207ENST00000498837 HNRNPLLQ8WVV9 542 aaKnown RBP15.42■□□□□ 0.06
SEC61A1-207ENST00000498837 HNRNPABQ99729 332 aaKnown RBP15.42■□□□□ 0.06
SEC61A1-207ENST00000498837 DMAC2Q9NW81 257 aa15.42■□□□□ 0.06
SEC61A1-207ENST00000498837 SLC27A6Q9Y2P4 619 aa15.42■□□□□ 0.06
SEC61A1-207ENST00000498837 NFE2L3Q9Y4A8 694 aa15.42■□□□□ 0.06
SEC61A1-207ENST00000498837 METTL12A8MUP2 240 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 BCAT2O15382 392 aaPredicted RBP15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 STX6O43752 255 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 CUTAO60888 179 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 CILPO75339 1184 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 PENKP01210 267 aaPredicted RBP15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 P4HA1P13674 534 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 AFMP43652 599 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 ASPAP45381 313 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 MFAP3P55082 362 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 ENPP2Q13822 863 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 ZACNQ401N2 412 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 FYB2Q5VWT5 728 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 CACUL1Q86Y37 369 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 MARCH9Q86YJ5 346 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 CADM4Q8NFZ8 388 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 CYFIP2Q96F07 1278 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 SIPA1Q96FS4 1042 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 TM7SF3Q9NS93 570 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 EIF2B4Q9UI10 523 aaKnown RBP15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 NAGPAQ9UK23 515 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 CLEC4EQ9ULY5 219 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 FNDC3AQ9Y2H6 1198 aaKnown RBP15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 RAXQ9Y2V3 346 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 PCDHA5Q9Y5H7 936 aa15.41■□□□□ 0.06
SEC61A1-207ENST00000498837 MUC22E2RYF6 1773 aaPredicted RBP15.4■□□□□ 0.06
SEC61A1-207ENST00000498837 PVALEFA0A1B0GWK0 134 aa15.4■□□□□ 0.06
SEC61A1-207ENST00000498837 ASS1P00966 412 aaKnown RBP15.4■□□□□ 0.06
SEC61A1-207ENST00000498837 RPN1P04843 607 aaKnown RBP15.4■□□□□ 0.06
SEC61A1-207ENST00000498837 HMBSP08397 361 aa15.4■□□□□ 0.06
SEC61A1-207ENST00000498837 ATXN1LP0C7T5 689 aaKnown RBP15.4■□□□□ 0.06
SEC61A1-207ENST00000498837 ZNF883P0CG24 379 aa15.4■□□□□ 0.06
SEC61A1-207ENST00000498837 MATKP42679 507 aa15.4■□□□□ 0.06
SEC61A1-207ENST00000498837 KIF11P52732 1056 aa15.4■□□□□ 0.06
SEC61A1-207ENST00000498837 COPAP53621 1224 aa15.4■□□□□ 0.06
SEC61A1-207ENST00000498837 ZNF234Q14588 700 aa15.4■□□□□ 0.06
SEC61A1-207ENST00000498837 HLA-BQ31612 363 aa15.4■□□□□ 0.06
SEC61A1-207ENST00000498837 SV2AQ7L0J3 742 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms