RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 TAZQ16635 292 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 PRSS53Q2L4Q9 553 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 C4orf46Q504U0 113 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 ARHGEF18Q6ZSZ5 1173 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 CPNE8Q86YQ8 564 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 MCOLN2Q8IZK6 566 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 JPH3Q8WXH2 748 aaPredicted RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 FAM136AQ96C01 138 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 RAB3IPQ96QF0 476 aaPredicted RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 MXRA8Q9BRK3 442 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 NUP85Q9BW27 656 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 TRIM31Q9BZY9 425 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 RNF208Q9H0X6 261 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 CENPHQ9H3R5 247 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 TMEM8AQ9HCN3 771 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 FGFR1OP2Q9NVK5 253 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 CYP39A1Q9NYL5 469 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 SENP1Q9P0U3 644 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 CTTNBP2NLQ9P2B4 639 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 KLHL14Q9P2G3 628 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 CHKBQ9Y259 395 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 STYXL1Q9Y6J8 313 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 DDTLA6NHG4 134 aaPredicted RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 NDC80O14777 642 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 CDH16O75309 829 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 LRRN2O75325 713 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 PROSCO94903 275 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 LDHAP00338 332 aaKnown RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 F2P00734 622 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 ADRB2P07550 413 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 VIMP08670 466 aaKnown RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 DHRS4L1P0CG22 281 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 TPBGLP0DKB5 382 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 ACADSP16219 412 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 ABCB4P21439 1286 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 CLNS1AP54105 237 aaKnown RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 RTP1P59025 263 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 KRT17Q04695 432 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 NFIAQ12857 509 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 PDK4Q16654 411 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 LONRF1Q17RB8 773 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 CERKLQ49MI3 558 aaPredicted RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 SLC45A4Q5BKX6 768 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 FAM133BQ5BKY9 247 aaKnown RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 LRRC38Q5VT99 294 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 TCERG1LQ5VWI1 586 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 IQSEC1Q6DN90 963 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 PLEKHA7Q6IQ23 1121 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 CXorf57Q6NSI4 855 aaKnown RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 PPP1R2P3Q6NXS1 205 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 SH2D5Q6ZV89 423 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 MON1BQ7L1V2 547 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 MTDHQ86UE4 582 aaKnown RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 ERICH1Q86X53 443 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 PHF13Q86YI8 300 aaPredicted RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 KSR1Q8IVT5 923 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.11□□□□□ -1.75
CLTC-209ENST00000498711 XXYLT1Q8NBI6 393 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 SMG8Q8ND04 991 aaKnown RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 PIGOQ8TEQ8 1089 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 PARD3BQ8TEW8 1205 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 ZFAND2BQ8WV99 257 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 RNF141Q8WVD5 230 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 TRIM11Q96F44 468 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 ZBED3Q96IU2 234 aaPredicted RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 SCLT1Q96NL6 688 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 IWS1Q96ST2 819 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 TRIM7Q9C029 511 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 MYLK2Q9H1R3 596 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 GSX1Q9H4S2 264 aaPredicted RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 C17orf75Q9HAS0 396 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 RNPEPL1Q9HAU8 725 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 RRAGCQ9HB90 399 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 CHST7Q9NS84 486 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 TXLNGQ9NUQ3 528 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 MAP3K20Q9NYL2 800 aaKnown RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 HSPBP1Q9NZL4 362 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 BAIAP2L1Q9UHR4 511 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 SLC24A2Q9UI40 661 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 SMG5Q9UPR3 1016 aaKnown RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 GPR55Q9Y2T6 319 aaPredicted RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 SF3B6Q9Y3B4 125 aaKnown RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 PCDHA9Q9Y5H5 950 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 USH1CQ9Y6N9 552 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 OTOFQ9HC10 1997 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 A0A1W2PRG0 241 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 ZNF891A8MT65 544 aaPredicted RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 E7ESA3 106 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 K7ESF4 209 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 DNALI1O14645 258 aaPredicted RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 GAS7O60861 476 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 PRKD3O94806 890 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 LUC7L3O95232 432 aaKnown RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 TGDSO95455 350 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 FESP07332 822 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 ARP10275 920 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 KRT13P13646 458 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 NID1P14543 1247 aa4.1□□□□□ -1.75
CLTC-209ENST00000498711 ACO1P21399 889 aaKnown RBP4.1□□□□□ -1.75
CLTC-209ENST00000498711 PAX7P23759 505 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms