RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	MRE11	P49959	708 aa		10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	COPB1	P53618	953 aa	Known RBP	10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	MRPS21	P82921	87 aa	Known RBP	10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	RAPGEF1	Q13905	1077 aa		10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	DRAP1	Q14919	205 aa	Predicted RBP	10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	E2F5	Q15329	346 aa		10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	MSANTD2	Q6P1R3	559 aa		10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	DENND1B	Q6P3S1	775 aa		10.99	□□□□□ -0.65
FXR1-222	ENST00000498658		Q6ZNB5	142 aa		10.99	□□□□□ -0.65
FXR1-222	ENST00000498658		Q6ZS52	159 aa		10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	UNC45B	Q8IWX7	931 aa		10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	SCUBE3	Q8IX30	993 aa		10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	CAMKK1	Q8N5S9	505 aa		10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	ZBTB44	Q8NCP5	570 aa		10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	NELL1	Q92832	810 aa		10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	BBS2	Q9BXC9	721 aa		10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	IRX2	Q9BZI1	471 aa	Predicted RBP	10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	MIS12	Q9H081	205 aa		10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	PDCL3	Q9H2J4	239 aa		10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	FBRSL1	Q9HCM7	1045 aa	Known RBP	10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	ARHGEF4	Q9NR80	690 aa		10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	SLC8A2	Q9UPR5	921 aa		10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	VPS13A	Q96RL7	3174 aa		10.99	□□□□□ -0.65
FXR1-222	ENST00000498658	MYO15A	Q9UKN7	3530 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	CCDC163	A0A0D9SF12	145 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	LGALS16	A8MUM7	142 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	NEDD8-MDP1	E9PL57	170 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	CAPN9	O14815	690 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	CACNG3	O60359	315 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	KAT7	O95251	611 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	LMNA	P02545	664 aa	Known RBP	10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	GLI1	P08151	1106 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	NCAM1	P13591	858 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	ZNF18	P17022	549 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	CORO1A	P31146	461 aa	Known RBP	10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	SATB1	Q01826	763 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	APBA1	Q02410	837 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	RING1	Q06587	406 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	PDCL	Q13371	301 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	NNT	Q13423	1086 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	GAS6	Q14393	721 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	TRIP4	Q15650	581 aa	Predicted RBP	10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	GAB4	Q2WGN9	574 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	ANO6	Q4KMQ2	910 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	NUGGC	Q68CJ6	796 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	SYT13	Q7L8C5	426 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	TRMT11	Q7Z4G4	463 aa	Known RBP	10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	SLC47A2	Q86VL8	602 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	LONP2	Q86WA8	852 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	TMEM25	Q86YD3	366 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	ZDHHC17	Q8IUH5	632 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	FMNL3	Q8IVF7	1028 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	ETFBKMT	Q8IXQ9	262 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	CPXM2	Q8N436	756 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	MSANTD4	Q8NCY6	345 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	IPO4	Q8TEX9	1081 aa	Known RBP	10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	NDRG1	Q92597	394 aa	Known RBP	10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	EDEM1	Q92611	657 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	FAM149B1	Q96BN6	582 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	PPP1R13B	Q96KQ4	1090 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	SERPINB11	Q96P15	392 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	DDX50	Q9BQ39	737 aa	Known RBP	10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	NAA15	Q9BXJ9	866 aa	Known RBP	10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	SYNC	Q9H7C4	482 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	POPDC2	Q9HBU9	364 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	TMEM51	Q9NW97	253 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	METRN	Q9UJH8	293 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	FHOD1	Q9Y613	1164 aa		10.98	□□□□□ -0.65
FXR1-222	ENST00000498658	TBC1D3B	A6NDS4	549 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658		E5RJQ4	531 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658		F8VZ95	297 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658		K7EQS6	105 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	PIK3R2	O00459	728 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	GFRA3	O60609	400 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	TULP3	O75386	442 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	LSM8	O95777	96 aa	Known RBP	10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	CALCA	P01258	141 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	KLKB1	P03952	638 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	HMBS	P08397	361 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	TYR	P14679	529 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	CYP11B1	P15538	503 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	CLCN1	P35523	988 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	SLC11A2	P49281	568 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	ZNF165	P49910	485 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	YWHAZ	P63104	245 aa	Known RBP	10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	TPM4	P67936	248 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	UBXN1	Q04323	297 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	MTA1	Q13330	715 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	NCAPH	Q15003	741 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	FILIP1L	Q4L180	1135 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	EFHC1	Q5JVL4	640 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	GRAMD4	Q6IC98	578 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	DPY19L2P1	Q6NXN4	242 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	TSSK4	Q6SA08	328 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	TPGS1	Q6ZTW0	290 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	TOGARAM2	Q6ZUX3	1019 aa		10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	ALYREF	Q86V81	257 aa	Known RBP	10.97	□□□□□ -0.65
FXR1-222	ENST00000498658	ZNF677	Q86XU0	584 aa		10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms