RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 TSPAN3O60637 253 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 TNFSF15O95150 251 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 ITGAVP06756 1048 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 LIPCP11150 499 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 EPHA8P29322 1005 aaPredicted RBP5.59□□□□□ -1.51
FXN-205ENST00000498653 TKTP29401 623 aaKnown RBP5.59□□□□□ -1.51
FXN-205ENST00000498653 RUNX1T1Q06455 604 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 GRIK3Q13003 919 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 ADAM9Q13443 819 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 DRP2Q13474 957 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 PKP1Q13835 747 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 MANEAQ5SRI9 462 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 PRAMEF14Q5SWL7 426 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 PIK3AP1Q6ZUJ8 805 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 ZSCAN1Q8NBB4 408 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 NUDT8Q8WV74 236 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 USP13Q92995 863 aaPredicted RBP5.59□□□□□ -1.51
FXN-205ENST00000498653 TNFRSF25Q93038 417 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 PGBD1Q96JS3 809 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 CEP63Q96MT8 703 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 ZNF396Q96N95 335 aaPredicted RBP5.59□□□□□ -1.51
FXN-205ENST00000498653 NAP1L4Q99733 375 aaKnown RBP5.59□□□□□ -1.51
FXN-205ENST00000498653 TASP1Q9H6P5 420 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 TM9SF3Q9HD45 589 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 UBN1Q9NPG3 1134 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 PRDM8Q9NQV8 689 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 FAM13BQ9NYF5 915 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 PARP2Q9UGN5 583 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 KCND3Q9UK17 655 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 HCN2Q9UL51 889 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 ZDHHC9Q9Y397 364 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 HES2Q9Y543 173 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 IPPQ9Y573 584 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 ENTPD2Q9Y5L3 495 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 ANK3Q12955 4377 aaKnown RBP5.59□□□□□ -1.52
FXN-205ENST00000498653 RYR1P21817 5038 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 POLEQ07864 2286 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 A0A087WZ62 844 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 CASTOR2A6NHX0 329 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 VNN2O95498 520 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 THEGLP0DJG4 465 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 ITGA4P13612 1032 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 FOSL1P15407 271 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 ATP2B1P20020 1258 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 CAPN3P20807 821 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 ITGA3P26006 1051 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 HOXA11P31270 313 aaPredicted RBP5.58□□□□□ -1.52
FXN-205ENST00000498653 SLC5A2P31639 672 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 LEPRP48357 1165 aaKnown RBP5.58□□□□□ -1.52
FXN-205ENST00000498653 TRAPPC10P48553 1259 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 KRT83P78385 493 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 ELAVL2Q12926 359 aaKnown RBP5.58□□□□□ -1.52
FXN-205ENST00000498653 FOXD4L6Q3SYB3 417 aaPredicted RBP5.58□□□□□ -1.52
FXN-205ENST00000498653 PRR30Q53SZ7 412 aaPredicted RBP5.58□□□□□ -1.52
FXN-205ENST00000498653 RILPL1Q5EBL4 403 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 EARS2Q5JPH6 523 aaKnown RBP5.58□□□□□ -1.52
FXN-205ENST00000498653 COX20Q5RI15 118 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 FOXD4L3Q6VB84 417 aaPredicted RBP5.58□□□□□ -1.52
FXN-205ENST00000498653 NEK8Q86SG6 692 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 C14orf80Q86SX3 495 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 HOMEZQ8IX15 550 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 ARL14Q8N4G2 192 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 TBCKQ8TEA7 893 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 NDRG1Q92597 394 aaKnown RBP5.58□□□□□ -1.52
FXN-205ENST00000498653 ERLEC1Q96DZ1 483 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 IFT43Q96FT9 208 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 CDHR1Q96JP9 859 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 ELF4Q99607 663 aaPredicted RBP5.58□□□□□ -1.52
FXN-205ENST00000498653 FDXACB1Q9BRP7 624 aaPredicted RBP5.58□□□□□ -1.52
FXN-205ENST00000498653 SLC46A2Q9BY10 475 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 GCOM2Q9BZD3 368 aaPredicted RBP5.58□□□□□ -1.52
FXN-205ENST00000498653 CXXC4Q9H2H0 198 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 ATXN3LQ9H3M9 355 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 OSGEPQ9NPF4 335 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 USP36Q9P275 1121 aaKnown RBP5.58□□□□□ -1.52
FXN-205ENST00000498653 PCDHGA7Q9Y5G6 932 aa5.58□□□□□ -1.52
FXN-205ENST00000498653 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.57□□□□□ -1.522e-15■■■■■ 31
FXN-205ENST00000498653 A0A1B0GVM2 712 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 KCNJ18B7U540 433 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 MAGEB2O15479 319 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 DFNA5O60443 496 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 CCNT1O60563 726 aaKnown RBP5.57□□□□□ -1.52
FXN-205ENST00000498653 BMP15O95972 392 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 CCNE2O96020 404 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 CYP3A4P08684 503 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 HOXB2P14652 356 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 GCFC2P16383 781 aaKnown RBP5.57□□□□□ -1.52
FXN-205ENST00000498653 MX2P20592 715 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 ABCB4P21439 1286 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 GABRR2P28476 465 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 TNFSF9P41273 254 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 MAP2K3P46734 347 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 KRT85P78386 507 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 KCNA1Q09470 495 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 MTMR1Q13613 665 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 MTF1Q14872 753 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 ZRSR2Q15696 482 aaKnown RBP5.57□□□□□ -1.52
FXN-205ENST00000498653 ZNF174Q15697 407 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 C14orf28Q4W4Y0 310 aa5.57□□□□□ -1.52
FXN-205ENST00000498653 TTC38Q5R3I4 469 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms