RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 CCDC163A0A0D9SF12 145 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 TBC1D3BA6NDS4 549 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 KCNJ18B7U540 433 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 THAP12O43422 761 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 MED7O43513 233 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 KLF8O95600 359 aaPredicted RBP19.24■□□□□ 0.67
HOXD11-202ENST00000498438 APBB3O95704 486 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 USP8P40818 1118 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 GPD2P43304 727 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 TNFRSF4P43489 277 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 KIR2DL1P43626 348 aaPredicted RBP19.24■□□□□ 0.67
HOXD11-202ENST00000498438 KCNJ12Q14500 433 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 MEA1Q16626 185 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 PREPLQ4J6C6 727 aaPredicted RBP19.24■□□□□ 0.67
HOXD11-202ENST00000498438 VWA3BQ502W6 1294 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 EMC10Q5UCC4 262 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 GRAMD4Q6IC98 578 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 CEP68Q76N32 757 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 DENND1CQ8IV53 801 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 TERB1Q8NA31 727 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 IL17RCQ8NAC3 791 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 TSTD1Q8NFU3 115 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 IRGQQ8WZA9 623 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 SHC3Q92529 594 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 XPO6Q96QU8 1125 aaKnown RBP19.24■□□□□ 0.67
HOXD11-202ENST00000498438 ST7Q9NRC1 585 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 SFMBT1Q9UHJ3 866 aa19.24■□□□□ 0.67
HOXD11-202ENST00000498438 AJAP1Q9UKB5 411 aaPredicted RBP19.24■□□□□ 0.67
HOXD11-202ENST00000498438 AGO1Q9UL18 857 aaKnown RBP19.24■□□□□ 0.67
HOXD11-202ENST00000498438 SDK1Q7Z5N4 2213 aa19.23■□□□□ 0.67
HOXD11-202ENST00000498438 FBXO21O94952 628 aa19.23■□□□□ 0.67
HOXD11-202ENST00000498438 LTFP02788 710 aa19.23■□□□□ 0.67
HOXD11-202ENST00000498438 C10orf76Q5T2E6 689 aa19.23■□□□□ 0.67
HOXD11-202ENST00000498438 LAIR1Q6GTX8 287 aa19.23■□□□□ 0.67
HOXD11-202ENST00000498438 KIAA2013Q8IYS2 634 aa19.23■□□□□ 0.67
HOXD11-202ENST00000498438 TXNDC5Q8NBS9 432 aaKnown RBP19.23■□□□□ 0.67
HOXD11-202ENST00000498438 ZNF606Q8WXB4 792 aa19.23■□□□□ 0.67
HOXD11-202ENST00000498438 P2RY11Q96G91 374 aa19.23■□□□□ 0.67
HOXD11-202ENST00000498438 MIS12Q9H081 205 aa19.23■□□□□ 0.67
HOXD11-202ENST00000498438 ZDHHC4Q9NPG8 344 aa19.23■□□□□ 0.67
HOXD11-202ENST00000498438 PLK2Q9NYY3 685 aa19.23■□□□□ 0.67
HOXD11-202ENST00000498438 GMEB2Q9UKD1 530 aa19.23■□□□□ 0.67
HOXD11-202ENST00000498438 HBS1LQ9Y450 684 aaKnown RBP19.23■□□□□ 0.67
HOXD11-202ENST00000498438 NFE2L3Q9Y4A8 694 aa19.23■□□□□ 0.67
HOXD11-202ENST00000498438 PES1O00541 588 aaKnown RBP19.22■□□□□ 0.67
HOXD11-202ENST00000498438 AXIN1O15169 862 aa19.22■□□□□ 0.67
HOXD11-202ENST00000498438 MSI1O43347 362 aaKnown RBP19.22■□□□□ 0.67
HOXD11-202ENST00000498438 RPP40O75818 363 aaKnown RBP19.22■□□□□ 0.67
HOXD11-202ENST00000498438 CHKAP35790 457 aa19.22■□□□□ 0.67
HOXD11-202ENST00000498438 RPL34P49207 117 aaKnown RBP19.22■□□□□ 0.67
HOXD11-202ENST00000498438 TRIP4Q15650 581 aaPredicted RBP19.22■□□□□ 0.67
HOXD11-202ENST00000498438 HSF5Q4G112 596 aaPredicted RBP19.22■□□□□ 0.67
HOXD11-202ENST00000498438 TCP11X2Q5H9J9 407 aa19.22■□□□□ 0.67
HOXD11-202ENST00000498438 MSANTD2Q6P1R3 559 aa19.22■□□□□ 0.67
HOXD11-202ENST00000498438 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.22■□□□□ 0.67
HOXD11-202ENST00000498438 GAB3Q8WWW8 586 aa19.22■□□□□ 0.67
HOXD11-202ENST00000498438 GOLGA1Q92805 767 aa19.22■□□□□ 0.67
HOXD11-202ENST00000498438 CYTH4Q9UIA0 394 aa19.22■□□□□ 0.67
HOXD11-202ENST00000498438 DNAJC12Q9UKB3 198 aa19.22■□□□□ 0.67
HOXD11-202ENST00000498438 CEP250Q9BV73 2442 aa19.21■□□□□ 0.67
HOXD11-202ENST00000498438 DMXL1Q9Y485 3027 aa19.21■□□□□ 0.67
HOXD11-202ENST00000498438 SGK1O00141 431 aa19.21■□□□□ 0.67
HOXD11-202ENST00000498438 PENKP01210 267 aaPredicted RBP19.21■□□□□ 0.67
HOXD11-202ENST00000498438 EEF1GP26641 437 aaKnown RBP19.21■□□□□ 0.67
HOXD11-202ENST00000498438 ACADSBP45954 432 aa19.21■□□□□ 0.67
HOXD11-202ENST00000498438 DGKGP49619 791 aa19.21■□□□□ 0.67
HOXD11-202ENST00000498438 CRY1Q16526 586 aa19.21■□□□□ 0.67
HOXD11-202ENST00000498438 FYB2Q5VWT5 728 aa19.21■□□□□ 0.67
HOXD11-202ENST00000498438 TMEM92Q6UXU6 159 aa19.21■□□□□ 0.67
HOXD11-202ENST00000498438 TOGARAM2Q6ZUX3 1019 aa19.21■□□□□ 0.67
HOXD11-202ENST00000498438 NUDT18Q6ZVK8 323 aa19.21■□□□□ 0.67
HOXD11-202ENST00000498438 CPXM2Q8N436 756 aa19.21■□□□□ 0.67
HOXD11-202ENST00000498438 ZNF513Q8N8E2 541 aaPredicted RBP19.21■□□□□ 0.67
HOXD11-202ENST00000498438 ENOX1Q8TC92 643 aaKnown RBP19.21■□□□□ 0.67
HOXD11-202ENST00000498438 SLC4A5Q9BY07 1137 aa19.21■□□□□ 0.67
HOXD11-202ENST00000498438 EBF1Q9UH73 591 aa19.21■□□□□ 0.67
HOXD11-202ENST00000498438 ADAM23O75077 832 aa19.2■□□□□ 0.66
HOXD11-202ENST00000498438 MBD3O95983 291 aa19.2■□□□□ 0.66
HOXD11-202ENST00000498438 PNMA6AP0CW24 399 aaPredicted RBP19.2■□□□□ 0.66
HOXD11-202ENST00000498438 HNRNPLP14866 589 aaKnown RBP eCLIP19.2■□□□□ 0.66
HOXD11-202ENST00000498438 HARS2P49590 506 aaKnown RBP19.2■□□□□ 0.66
HOXD11-202ENST00000498438 DGKEP52429 567 aa19.2■□□□□ 0.66
HOXD11-202ENST00000498438 EOGTQ5NDL2 527 aa19.2■□□□□ 0.66
HOXD11-202ENST00000498438 ANO7Q6IWH7 933 aa19.2■□□□□ 0.66
HOXD11-202ENST00000498438 DPY19L2P1Q6NXN4 242 aa19.2■□□□□ 0.66
HOXD11-202ENST00000498438 C11orf57Q6ZUT1 292 aaPredicted RBP19.2■□□□□ 0.66
HOXD11-202ENST00000498438 SCUBE3Q8IX30 993 aa19.2■□□□□ 0.66
HOXD11-202ENST00000498438 FAM217AQ8IXS0 508 aa19.2■□□□□ 0.66
HOXD11-202ENST00000498438 STK32AQ8WU08 396 aa19.2■□□□□ 0.66
HOXD11-202ENST00000498438 TAB2Q9NYJ8 693 aa19.2■□□□□ 0.66
HOXD11-202ENST00000498438 HCN2Q9UL51 889 aa19.2■□□□□ 0.66
HOXD11-202ENST00000498438 E5RJQ4 531 aa19.19■□□□□ 0.66
HOXD11-202ENST00000498438 SART1O43290 800 aaKnown RBP19.19■□□□□ 0.66
HOXD11-202ENST00000498438 CISD3P0C7P0 127 aa19.19■□□□□ 0.66
HOXD11-202ENST00000498438 KCNMA1Q12791 1236 aa19.19■□□□□ 0.66
HOXD11-202ENST00000498438 PDCLQ13371 301 aa19.19■□□□□ 0.66
HOXD11-202ENST00000498438 CDKAL1Q5VV42 579 aa19.19■□□□□ 0.66
HOXD11-202ENST00000498438 EGFLAMQ63HQ2 1017 aa19.19■□□□□ 0.66
HOXD11-202ENST00000498438 SASS6Q6UVJ0 657 aa19.19■□□□□ 0.66
HOXD11-202ENST00000498438 RASSF3Q86WH2 238 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms