RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 ZNF252P-AS1Q0IIN9 211 aa19.48■□□□□ 0.71
PRKCB-209ENST00000498058 KRT39Q6A163 491 aa19.48■□□□□ 0.71
PRKCB-209ENST00000498058 SLC23A3Q6PIS1 610 aa19.48■□□□□ 0.71
PRKCB-209ENST00000498058 CHPFQ8IZ52 775 aa19.48■□□□□ 0.71
PRKCB-209ENST00000498058 ZNF276Q8N554 614 aa19.48■□□□□ 0.71
PRKCB-209ENST00000498058 DEFB124Q8NES8 71 aa19.48■□□□□ 0.71
PRKCB-209ENST00000498058 NDRG1Q92597 394 aaKnown RBP19.48■□□□□ 0.71
PRKCB-209ENST00000498058 HEXIM2Q96MH2 286 aaKnown RBP19.48■□□□□ 0.71
PRKCB-209ENST00000498058 CISHQ9NSE2 258 aa19.48■□□□□ 0.71
PRKCB-209ENST00000498058 CLEC4EQ9ULY5 219 aa19.48■□□□□ 0.71
PRKCB-209ENST00000498058 CACNA1EQ15878 2313 aa19.48■□□□□ 0.71
PRKCB-209ENST00000498058 CEP295Q9C0D2 2601 aa19.48■□□□□ 0.71
PRKCB-209ENST00000498058 CFAP47Q6ZTR5 3102 aa19.47■□□□□ 0.71
PRKCB-209ENST00000498058 TULP2O00295 520 aa19.47■□□□□ 0.71
PRKCB-209ENST00000498058 GADD45BO75293 160 aaPredicted RBP19.47■□□□□ 0.71
PRKCB-209ENST00000498058 MBD3O95983 291 aa19.47■□□□□ 0.71
PRKCB-209ENST00000498058 HMBSP08397 361 aa19.47■□□□□ 0.71
PRKCB-209ENST00000498058 CSRP1P21291 193 aaKnown RBP19.47■□□□□ 0.71
PRKCB-209ENST00000498058 RPL13P26373 211 aaKnown RBP19.47■□□□□ 0.71
PRKCB-209ENST00000498058 GTF2H1P32780 548 aa19.47■□□□□ 0.71
PRKCB-209ENST00000498058 RPL6Q02878 288 aaKnown RBP19.47■□□□□ 0.71
PRKCB-209ENST00000498058 PREPLQ4J6C6 727 aaPredicted RBP19.47■□□□□ 0.71
PRKCB-209ENST00000498058 SPDYCQ5MJ68 293 aa19.47■□□□□ 0.71
PRKCB-209ENST00000498058 FYB2Q5VWT5 728 aa19.47■□□□□ 0.71
PRKCB-209ENST00000498058 BHLHA9Q7RTU4 235 aa19.47■□□□□ 0.71
PRKCB-209ENST00000498058 PIGZQ86VD9 579 aa19.47■□□□□ 0.71
PRKCB-209ENST00000498058 CCDC47Q96A33 483 aaKnown RBP19.47■□□□□ 0.71
PRKCB-209ENST00000498058 RAB20Q9NX57 234 aa19.47■□□□□ 0.71
PRKCB-209ENST00000498058 CLIC5Q9NZA1 410 aa19.47■□□□□ 0.71
PRKCB-209ENST00000498058 RASAL2Q9UJF2 1139 aa19.47■□□□□ 0.71
PRKCB-209ENST00000498058 CYP8B1Q9UNU6 501 aa19.47■□□□□ 0.71
PRKCB-209ENST00000498058 ZFHX4Q86UP3 3567 aa19.47■□□□□ 0.71
PRKCB-209ENST00000498058 PENKP01210 267 aaPredicted RBP19.46■□□□□ 0.71
PRKCB-209ENST00000498058 MXI1P50539 228 aa19.46■□□□□ 0.71
PRKCB-209ENST00000498058 ZNF33AQ06730 810 aa19.46■□□□□ 0.71
PRKCB-209ENST00000498058 GOLGA8FQ08AF8 430 aa19.46■□□□□ 0.71
PRKCB-209ENST00000498058 GOLGA8DPQ0D2H9 430 aa19.46■□□□□ 0.71
PRKCB-209ENST00000498058 EFEMP1Q12805 493 aa19.46■□□□□ 0.71
PRKCB-209ENST00000498058 FOXC1Q12948 553 aa19.46■□□□□ 0.71
PRKCB-209ENST00000498058 PNOCQ13519 176 aa19.46■□□□□ 0.71
PRKCB-209ENST00000498058 BYSLQ13895 437 aaKnown RBP19.46■□□□□ 0.71
PRKCB-209ENST00000498058 GEN1Q17RS7 908 aa19.46■□□□□ 0.71
PRKCB-209ENST00000498058 EDRF1Q3B7T1 1238 aa19.46■□□□□ 0.71
PRKCB-209ENST00000498058 CBWD6Q4V339 395 aa19.46■□□□□ 0.71
PRKCB-209ENST00000498058 RAB41Q5JT25 222 aa19.46■□□□□ 0.71
PRKCB-209ENST00000498058 CBWD3Q5JTY5 395 aa19.46■□□□□ 0.71
PRKCB-209ENST00000498058 CBWD5Q5RIA9 395 aa19.46■□□□□ 0.71
PRKCB-209ENST00000498058 NUDT18Q6ZVK8 323 aa19.46■□□□□ 0.71
PRKCB-209ENST00000498058 OR2I1PQ8NGU4 316 aa19.46■□□□□ 0.71
PRKCB-209ENST00000498058 TMEM176AQ96HP8 235 aa19.46■□□□□ 0.71
PRKCB-209ENST00000498058 NUSAP1Q9BXS6 441 aaKnown RBP19.46■□□□□ 0.71
PRKCB-209ENST00000498058 C1QTNF9BB2RNN3 333 aa19.45■□□□□ 0.7
PRKCB-209ENST00000498058 AP5Z1O43299 807 aa19.45■□□□□ 0.7
PRKCB-209ENST00000498058 C1QTNF9P0C862 333 aa19.45■□□□□ 0.7
PRKCB-209ENST00000498058 RALAP11233 206 aa19.45■□□□□ 0.7
PRKCB-209ENST00000498058 CEACAM1P13688 526 aa19.45■□□□□ 0.7
PRKCB-209ENST00000498058 PRCPP42785 496 aa19.45■□□□□ 0.7
PRKCB-209ENST00000498058 PSEN1P49768 467 aa19.45■□□□□ 0.7
PRKCB-209ENST00000498058 PMS1P54277 932 aaKnown RBP19.45■□□□□ 0.7
PRKCB-209ENST00000498058 MFAP3P55082 362 aa19.45■□□□□ 0.7
PRKCB-209ENST00000498058 LMAN2Q12907 356 aa19.45■□□□□ 0.7
PRKCB-209ENST00000498058 ARHGAP17Q68EM7 881 aa19.45■□□□□ 0.7
PRKCB-209ENST00000498058 FBXL13Q8NEE6 735 aa19.45■□□□□ 0.7
PRKCB-209ENST00000498058 MRGPRX1Q96LB2 322 aa19.45■□□□□ 0.7
PRKCB-209ENST00000498058 TMEM121BQ9BXQ6 578 aaPredicted RBP19.45■□□□□ 0.7
PRKCB-209ENST00000498058 CAPN10Q9HC96 672 aa19.45■□□□□ 0.7
PRKCB-209ENST00000498058 AGO1Q9UL18 857 aaKnown RBP19.45■□□□□ 0.7
PRKCB-209ENST00000498058 CFIP05156 583 aa19.44■□□□□ 0.7
PRKCB-209ENST00000498058 TRIM21P19474 475 aaKnown RBP19.44■□□□□ 0.7
PRKCB-209ENST00000498058 CORO1AP31146 461 aaKnown RBP19.44■□□□□ 0.7
PRKCB-209ENST00000498058 SLC36A4Q6YBV0 504 aa19.44■□□□□ 0.7
PRKCB-209ENST00000498058 RBBP8NLQ8NC74 664 aaPredicted RBP19.44■□□□□ 0.7
PRKCB-209ENST00000498058 ERCC4Q92889 916 aaPredicted RBP19.44■□□□□ 0.7
PRKCB-209ENST00000498058 PIWIL1Q96J94 861 aaKnown RBP19.44■□□□□ 0.7
PRKCB-209ENST00000498058 UBXN6Q9BZV1 441 aa19.44■□□□□ 0.7
PRKCB-209ENST00000498058 HOOK1Q9UJC3 728 aaKnown RBP19.44■□□□□ 0.7
PRKCB-209ENST00000498058 SLC6A14Q9UN76 642 aa19.44■□□□□ 0.7
PRKCB-209ENST00000498058 SLC27A6Q9Y2P4 619 aa19.44■□□□□ 0.7
PRKCB-209ENST00000498058 STON1Q9Y6Q2 735 aa19.44■□□□□ 0.7
PRKCB-209ENST00000498058 AKAP13Q12802 2813 aa19.43■□□□□ 0.7
PRKCB-209ENST00000498058 CKAP5Q14008 2032 aa19.43■□□□□ 0.7
PRKCB-209ENST00000498058 IL12RB1P42701 662 aa19.43■□□□□ 0.7
PRKCB-209ENST00000498058 YWHAGP61981 247 aaKnown RBP eCLIP19.43■□□□□ 0.7
PRKCB-209ENST00000498058 SEMA3BQ13214 749 aa19.43■□□□□ 0.7
PRKCB-209ENST00000498058 DUOXA1Q1HG43 343 aa19.43■□□□□ 0.7
PRKCB-209ENST00000498058 FUT11Q495W5 492 aa19.43■□□□□ 0.7
PRKCB-209ENST00000498058 SDE2Q6IQ49 451 aa19.43■□□□□ 0.7
PRKCB-209ENST00000498058 PIP4P1Q86T03 277 aa19.43■□□□□ 0.7
PRKCB-209ENST00000498058 DENND1CQ8IV53 801 aa19.43■□□□□ 0.7
PRKCB-209ENST00000498058 ZC3H3Q8IXZ2 948 aaKnown RBP19.43■□□□□ 0.7
PRKCB-209ENST00000498058 TRIML1Q8N9V2 468 aa19.43■□□□□ 0.7
PRKCB-209ENST00000498058 ANKRD52Q8NB46 1076 aa19.43■□□□□ 0.7
PRKCB-209ENST00000498058 CCDC150Q8NCX0 1101 aa19.43■□□□□ 0.7
PRKCB-209ENST00000498058 FAXDC2Q96IV6 333 aa19.43■□□□□ 0.7
PRKCB-209ENST00000498058 HSPA12BQ96MM6 686 aa19.43■□□□□ 0.7
PRKCB-209ENST00000498058 ULBP1Q9BZM6 244 aa19.43■□□□□ 0.7
PRKCB-209ENST00000498058 THAP10Q9P2Z0 257 aaPredicted RBP19.43■□□□□ 0.7
PRKCB-209ENST00000498058 SLC12A8A0AV02 714 aa19.42■□□□□ 0.7
PRKCB-209ENST00000498058 GFRA2O00451 464 aa19.42■□□□□ 0.7
PRKCB-209ENST00000498058 CETN3O15182 167 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms