RNA–Protein interactions for RNA: ENST00000497964.1

MACF1-226, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 4,160 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-226ENST00000497964 CHCHD3Q9NX63 227 aaKnown RBP7.41□□□□□ -1.22
MACF1-226ENST00000497964 TSPAN16Q9UKR8 245 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 AP4E1Q9UPM8 1137 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 A0A096LPK6 155 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 SPDYE2BA6NHP3 402 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 TPP1O14773 563 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 HNRNPRO43390 633 aaKnown RBP7.41□□□□□ -1.22
MACF1-226ENST00000497964 PMPCBO75439 489 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 CHEK2O96017 543 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 CFHP08603 1231 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 CD48P09326 243 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 SPDYE6P0CI01 402 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 MMP8P22894 467 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 EIF4BP23588 611 aaKnown RBP7.41□□□□□ -1.22
MACF1-226ENST00000497964 GAD2Q05329 585 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 CACNB2Q08289 660 aaPredicted RBP7.41□□□□□ -1.22
MACF1-226ENST00000497964 DGKDQ16760 1214 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 SLC5A9Q2M3M2 681 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 TWF2Q6IBS0 349 aaKnown RBP7.41□□□□□ -1.22
MACF1-226ENST00000497964 HPS6Q86YV9 775 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 WDR49Q8IV35 697 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 CLEC4FQ8N1N0 589 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 PCDH20Q8N6Y1 951 aaKnown RBP7.41□□□□□ -1.22
MACF1-226ENST00000497964 ZNF280CQ8ND82 737 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 CDC26Q8NHZ8 85 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 WDR60Q8WVS4 1066 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 TRAPPC12Q8WVT3 735 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 MMADHCQ9H3L0 296 aaPredicted RBP7.41□□□□□ -1.22
MACF1-226ENST00000497964 ZNF395Q9H8N7 513 aaPredicted RBP7.41□□□□□ -1.22
MACF1-226ENST00000497964 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.41□□□□□ -1.22
MACF1-226ENST00000497964 ORC6Q9Y5N6 252 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 SNX5Q9Y5X3 404 aa7.41□□□□□ -1.22
MACF1-226ENST00000497964 SAC3D1A6NKF1 404 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 M0QYT0 321 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 SUPT7LO94864 414 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 CST3P01034 146 aaPredicted RBP7.4□□□□□ -1.22
MACF1-226ENST00000497964 ALDH1A3P47895 512 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 NAGLUP54802 743 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 HADHBP55084 474 aaKnown RBP7.4□□□□□ -1.22
MACF1-226ENST00000497964 MPP3Q13368 585 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 PDK2Q15119 407 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 AGKQ53H12 422 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 RNASEH2BQ5TBB1 312 aaKnown RBP7.4□□□□□ -1.22
MACF1-226ENST00000497964 TXNRD3NBQ6F5E7 133 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 RBM44Q6ZP01 1051 aaKnown RBP7.4□□□□□ -1.22
MACF1-226ENST00000497964 SAMD7Q7Z3H4 446 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 SETD3Q86TU7 594 aaPredicted RBP7.4□□□□□ -1.22
MACF1-226ENST00000497964 PHF13Q86YI8 300 aaPredicted RBP7.4□□□□□ -1.22
MACF1-226ENST00000497964 RNF139Q8WU17 664 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 BSNDQ8WZ55 320 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 GJD4Q96KN9 370 aaPredicted RBP7.4□□□□□ -1.22
MACF1-226ENST00000497964 DMAP1Q9NPF5 467 aaPredicted RBP7.4□□□□□ -1.22
MACF1-226ENST00000497964 PNPOQ9NVS9 261 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 GGA3Q9NZ52 723 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 TRIM13O60858 407 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 VDRP11473 427 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 ADSSP30520 456 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 NDST1P52848 882 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 PLK1P53350 603 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 GDF10P55107 478 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 ADARP55265 1226 aaKnown RBP7.4□□□□□ -1.22
MACF1-226ENST00000497964 MGAT5Q09328 741 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 LIN52Q52LA3 116 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 ZC3H12AQ5D1E8 599 aaKnown RBP7.4□□□□□ -1.22
MACF1-226ENST00000497964 C6orf10Q5SRN2 563 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 DACT2Q5SW24 774 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 VWA5B1Q5TIE3 1220 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 DDI1Q8WTU0 396 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 SIKE1Q9BRV8 207 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 PAIP1Q9H074 479 aaKnown RBP7.4□□□□□ -1.22
MACF1-226ENST00000497964 ETNK2Q9NVF9 386 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 PKD2L2Q9NZM6 624 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 CCDC167Q9P0B6 97 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 RABGEF1Q9UJ41 708 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 KDM3BQ7LBC6 1761 aa7.4□□□□□ -1.22
MACF1-226ENST00000497964 MED1Q15648 1581 aaPredicted RBP7.4□□□□□ -1.23
MACF1-226ENST00000497964 SIGLEC16A6NMB1 481 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 PHGDHO43175 533 aaKnown RBP7.4□□□□□ -1.23
MACF1-226ENST00000497964 MICAL2O94851 1124 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 TNFAIP8O95379 198 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 RARBP10826 455 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 GNL1P36915 607 aaPredicted RBP7.4□□□□□ -1.23
MACF1-226ENST00000497964 CHN2P52757 468 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 STX5Q13190 355 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 INPP5AQ14642 412 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 GSTA3Q16772 222 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 FUT11Q495W5 492 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 LRRC38Q5VT99 294 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 PLEKHA7Q6IQ23 1121 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 GPR141Q7Z602 305 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 CMC1Q7Z7K0 106 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 CLVS1Q8IUQ0 354 aaPredicted RBP7.4□□□□□ -1.23
MACF1-226ENST00000497964 SCN4BQ8IWT1 228 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 PDCD6IPQ8WUM4 868 aaKnown RBP7.4□□□□□ -1.23
MACF1-226ENST00000497964 SEC14L1Q92503 715 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 CPB2Q96IY4 423 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 ZNF333Q96JL9 665 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 PIF1Q9H611 641 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 PLEKHA5Q9HAU0 1116 aa7.4□□□□□ -1.23
MACF1-226ENST00000497964 PIDD1Q9HB75 910 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms