RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 HSFY1Q96LI6 401 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 STMN4Q9H169 189 aaPredicted RBP12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 PCDH9Q9HC56 1237 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 HESX1Q9UBX0 185 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 NKX1-2Q9UD57 310 aaPredicted RBP12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 GINS2Q9Y248 185 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 SQORQ9Y6N5 450 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 FRMPD3Q5JV73 1810 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 LRRD1A4D1F6 860 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 GABRDO14764 452 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 GABBR2O75899 941 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 STX2P32856 288 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 GNASQ5JWF2 1037 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 MFSD5Q6N075 450 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 PMF1Q6P1K2 205 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 ZNF365Q70YC5 407 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 PEX5LQ8IYB4 626 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 ZBTB8BQ8NAP8 495 aaPredicted RBP12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 APPL2Q8NEU8 664 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 TMEM237Q96Q45 408 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 HNRNPABQ99729 332 aaKnown RBP12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 RSAD1Q9HA92 442 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 ETNK1Q9HBU6 452 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 ARHGEF3Q9NR81 526 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 TUBA8Q9NY65 449 aaPredicted RBP12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 CROTQ9UKG9 612 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 USP18Q9UMW8 372 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 GABRQQ9UN88 632 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 GIT1Q9Y2X7 761 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 ARL2BPQ9Y2Y0 163 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 TMEM88BA6NKF7 163 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 PI4K2BG5E9Z4 385 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 INPPL1O15357 1258 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 ZNF623O75123 536 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 STK10O94804 968 aaKnown RBP12□□□□□ -0.49
SNRNP200-208ENST00000497539 ALADP13716 330 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 CCND1P24385 295 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 ITGA8P53708 1063 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 PDK2Q15119 407 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 GLRA4Q5JXX5 417 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 ANKRD20A2Q5SQ80 823 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 ANKRD20A1Q5TYW2 823 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 ANKRD20A3Q5VUR7 823 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 ECHDC2Q86YB7 292 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 ZCCHC9Q8N567 271 aaKnown RBP12□□□□□ -0.49
SNRNP200-208ENST00000497539 C12orf29Q8N999 325 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 RXFP2Q8WXD0 754 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 SPOCK2Q92563 424 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 FAF2Q96CS3 445 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 TNIP3Q96KP6 325 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 UBE2OQ9C0C9 1292 aaKnown RBP12□□□□□ -0.49
SNRNP200-208ENST00000497539 UBAP1Q9NZ09 502 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 DNPEPQ9ULA0 475 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 A8MXQ7 604 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 APOC4-APOC2K7ER74 178 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 DNALI1O14645 258 aaPredicted RBP12□□□□□ -0.49
SNRNP200-208ENST00000497539 MDM4O15151 490 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 APOC2P02655 101 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 CHRNA1P02708 482 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 ABHD2P08910 425 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 KRT10P13645 584 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 ALOX15P16050 662 aaPredicted RBP12□□□□□ -0.49
SNRNP200-208ENST00000497539 FOXN2P32314 431 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 GNL1P36915 607 aaPredicted RBP12□□□□□ -0.49
SNRNP200-208ENST00000497539 FLT3LGP49771 235 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 PSMD7P51665 324 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 LILRA4P59901 499 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 DSC3Q14574 896 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 CCDC14Q49A88 953 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 HP1BP3Q5SSJ5 553 aaPredicted RBP12□□□□□ -0.49
SNRNP200-208ENST00000497539 MAP3K21Q5TCX8 1036 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 LCA5Q86VQ0 697 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 SLC15A3Q8IY34 581 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 EMC1Q8N766 993 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 SMC1BQ8NDV3 1235 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 CKAP2Q8WWK9 683 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 RSPH1Q8WYR4 309 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 KCTD13Q8WZ19 329 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 UTP4Q969X6 686 aaKnown RBP12□□□□□ -0.49
SNRNP200-208ENST00000497539 C9orf72Q96LT7 481 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 PEBP4Q96S96 227 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 LBHD1Q9BQE6 289 aaPredicted RBP12□□□□□ -0.49
SNRNP200-208ENST00000497539 ARHGAP39Q9C0H5 1083 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 SNX25Q9H3E2 840 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 FAM105AQ9NUU6 356 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 KLHL11Q9NVR0 708 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 ANAPC5Q9UJX4 755 aa12□□□□□ -0.49
SNRNP200-208ENST00000497539 ZMYND8Q9ULU4 1186 aaPredicted RBP12□□□□□ -0.49
SNRNP200-208ENST00000497539 XPO1O14980 1071 aaKnown RBP11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 GPR182O15218 404 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 PAPSS1O43252 624 aaPredicted RBP11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 SPAG7O75391 227 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 CABYRO75952 493 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 GJC1P36383 396 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 CACNB2Q08289 660 aaPredicted RBP11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 BOLA3Q53S33 107 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 FAM47CQ5HY64 1035 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 OR6B2Q6IFH4 312 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 ADGRF2Q8IZF7 708 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 TMEM86AQ8N2M4 240 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms