RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 SCLT1Q96NL6 688 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 BBC3Q96PG8 261 aaPredicted RBP5.52□□□□□ -1.53
VPS36-206ENST00000497149 PAAF1Q9BRP4 392 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 DUSP26Q9BV47 211 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 KRTAP17-1Q9BYP8 105 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 PRDM8Q9NQV8 689 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 IL17RBQ9NRM6 502 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 LUZP4Q9P127 313 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 SUV39H1O43463 412 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 ZNF37AP17032 561 aaPredicted RBP5.51□□□□□ -1.53
VPS36-206ENST00000497149 MMP8P22894 467 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 AKT1P31749 480 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 PPM1FP49593 454 aaPredicted RBP5.51□□□□□ -1.53
VPS36-206ENST00000497149 RENBPP51606 427 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 SOX10P56693 466 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 CYP4F2P78329 520 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 TIGD6Q17RP2 521 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 KIRREL2Q6UWL6 708 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 NAPRTQ6XQN6 538 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 SLC29A4Q7RTT9 530 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 ZNF804AQ7Z570 1209 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 TRABD2AQ86V40 505 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 C12orf76Q8N812 135 aaPredicted RBP5.51□□□□□ -1.53
VPS36-206ENST00000497149 FAM71DQ8N9W8 422 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 SLC16A11Q8NCK7 471 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 MCRS1Q96EZ8 462 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 EIF3CQ99613 913 aaKnown RBP5.51□□□□□ -1.53
VPS36-206ENST00000497149 DDX23Q9BUQ8 820 aaKnown RBP5.51□□□□□ -1.53
VPS36-206ENST00000497149 SYNPO2LQ9H987 977 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 SAP30LQ9HAJ7 183 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 VPS45Q9NRW7 570 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 SRP68Q9UHB9 627 aaKnown RBP5.51□□□□□ -1.53
VPS36-206ENST00000497149 TLK1Q9UKI8 766 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 NFU1Q9UMS0 254 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 DAPP1Q9UN19 280 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 DMRT1Q9Y5R6 373 aa5.51□□□□□ -1.53
VPS36-206ENST00000497149 GXYLT2A0PJZ3 443 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 FAM90A18PA6NE21 464 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 FAM90A16PA6NEW6 464 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 FAM90A9PA6NNJ1 464 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 FAM90A5PA8MXJ8 464 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 M0QZQ0 153 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 RPP40O75818 363 aaKnown RBP5.5□□□□□ -1.53
VPS36-206ENST00000497149 HNRNPCP07910 306 aaKnown RBP eCLIP5.5□□□□□ -1.53
VPS36-206ENST00000497149 FAM90A15PP0C7V4 464 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 FAM90A14PP0C7W9 464 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 TMIGD3P0DMS9 266 aaPredicted RBP5.5□□□□□ -1.53
VPS36-206ENST00000497149 WT1P19544 449 aaPredicted RBP5.5□□□□□ -1.53
VPS36-206ENST00000497149 CST5P28325 142 aaPredicted RBP5.5□□□□□ -1.53
VPS36-206ENST00000497149 GPC5P78333 572 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 TXNL4AP83876 142 aaKnown RBP5.5□□□□□ -1.53
VPS36-206ENST00000497149 RAPGEF1Q13905 1077 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 BTBD16Q32M84 506 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 TMEM95Q3KNT9 176 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 ZNF362Q5T0B9 420 aaPredicted RBP5.5□□□□□ -1.53
VPS36-206ENST00000497149 AKNAD1Q5T1N1 836 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 CEP85Q6P2H3 762 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 KRT27Q7Z3Y8 459 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 CPXCR1Q8N123 301 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 TERB1Q8NA31 727 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 SLC22A17Q8WUG5 538 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 TRIM63Q969Q1 353 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 EDC3Q96F86 508 aaKnown RBP5.5□□□□□ -1.53
VPS36-206ENST00000497149 UROC1Q96N76 676 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 MACROD1Q9BQ69 325 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 FAM167BQ9BTA0 163 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 CINPQ9BW66 212 aaPredicted RBP5.5□□□□□ -1.53
VPS36-206ENST00000497149 CIPCQ9C0C6 399 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 VPS16Q9H269 839 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 USP29Q9HBJ7 922 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 CPNE5Q9HCH3 593 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 ITM2CQ9NQX7 267 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 TFCP2L1Q9NZI6 479 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 ADAM21Q9UKJ8 722 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 CNTN6Q9UQ52 1028 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 GPR52Q9Y2T5 361 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 PCDHB7Q9Y5E2 793 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 DGKBQ9Y6T7 804 aa5.5□□□□□ -1.53
VPS36-206ENST00000497149 HMX3A6NHT5 357 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 KIF28PB7ZC32 967 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 CREB3O43889 395 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 EXOC3O60645 756 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 PRAMEF2O60811 474 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 PPP6R2O75170 966 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 ALADP13716 330 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 COPB1P53618 953 aaKnown RBP5.49□□□□□ -1.53
VPS36-206ENST00000497149 ARL4CP56559 192 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 TGFB2P61812 414 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 HOXA4Q00056 320 aaPredicted RBP5.49□□□□□ -1.53
VPS36-206ENST00000497149 CFHR3Q02985 330 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 COL10A1Q03692 680 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 CCDC15Q0P6D6 951 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 PPFIA1Q13136 1202 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 TAF5Q15542 800 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 ACSM6Q6P461 480 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 NFRKBQ6P4R8 1299 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 RAB11FIP2Q7L804 512 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 BCDIN3DQ7Z5W3 292 aaKnown RBP5.49□□□□□ -1.53
VPS36-206ENST00000497149 ZNF354CQ86Y25 554 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 SUGP1Q8IWZ8 645 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms