RNA–Protein interactions for RNA: ENST00000496489.5

NCK1-212, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-212ENST00000496489 CLASRPQ8N2M8 674 aaKnown RBP3.24□□□□□ -1.89
NCK1-212ENST00000496489 GALNT15Q8N3T1 639 aa3.24□□□□□ -1.89
NCK1-212ENST00000496489 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.24□□□□□ -1.89
NCK1-212ENST00000496489 WDR60Q8WVS4 1066 aa3.24□□□□□ -1.89
NCK1-212ENST00000496489 CTHRC1Q96CG8 243 aa3.24□□□□□ -1.89
NCK1-212ENST00000496489 FAM167BQ9BTA0 163 aa3.24□□□□□ -1.89
NCK1-212ENST00000496489 DUSP26Q9BV47 211 aa3.24□□□□□ -1.89
NCK1-212ENST00000496489 CIPCQ9C0C6 399 aa3.24□□□□□ -1.89
NCK1-212ENST00000496489 CPNE5Q9HCH3 593 aa3.24□□□□□ -1.89
NCK1-212ENST00000496489 PRDM8Q9NQV8 689 aa3.24□□□□□ -1.89
NCK1-212ENST00000496489 FBXO28Q9NVF7 368 aa3.24□□□□□ -1.89
NCK1-212ENST00000496489 ASB6Q9NWX5 421 aa3.24□□□□□ -1.89
NCK1-212ENST00000496489 LUZP4Q9P127 313 aa3.24□□□□□ -1.89
NCK1-212ENST00000496489 MGAT4CQ9UBM8 478 aa3.24□□□□□ -1.89
NCK1-212ENST00000496489 TLK1Q9UKI8 766 aa3.24□□□□□ -1.89
NCK1-212ENST00000496489 DGKBQ9Y6T7 804 aa3.24□□□□□ -1.89
NCK1-212ENST00000496489 IRAK2O43187 625 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 EXOC3O60645 756 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 PRAMEF2O60811 474 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 RHOBTB3O94955 611 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 FGAP02671 866 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 HNRNPCP07910 306 aaKnown RBP eCLIP3.23□□□□□ -1.89
NCK1-212ENST00000496489 FAM163BP0C2L3 166 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 DHRS4L1P0CG22 281 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 MYCLP12524 364 aaPredicted RBP3.23□□□□□ -1.89
NCK1-212ENST00000496489 ALADP13716 330 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 GPD1P21695 349 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 THBS4P35443 961 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 RENBPP51606 427 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 COPB1P53618 953 aaKnown RBP3.23□□□□□ -1.89
NCK1-212ENST00000496489 PNLIPRP1P54315 467 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 INHBCP55103 352 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 POLE2P56282 527 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 RAE1P78406 368 aaKnown RBP3.23□□□□□ -1.89
NCK1-212ENST00000496489 RNASELQ05823 741 aaKnown RBP3.23□□□□□ -1.89
NCK1-212ENST00000496489 SF3A3Q12874 501 aaKnown RBP eCLIP3.23□□□□□ -1.89
NCK1-212ENST00000496489 BIRC3Q13489 604 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 RAPGEF1Q13905 1077 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 RPS6KA2Q15349 733 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 C4orf46Q504U0 113 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 RNASE12Q5GAN4 147 aaKnown RBP3.23□□□□□ -1.89
NCK1-212ENST00000496489 FAM90A2PQ658T7 463 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 MTHFD1LQ6UB35 978 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 RFX8Q6ZV50 586 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 RRAGAQ7L523 313 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 RAB11FIP2Q7L804 512 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 TICAM2Q86XR7 235 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 ZNF354CQ86Y25 554 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 SLC44A2Q8IWA5 706 aaPredicted RBP3.23□□□□□ -1.89
NCK1-212ENST00000496489 SFTPA1Q8IWL2 248 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 AMER2Q8N7J2 671 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 PNPLA1Q8N8W4 532 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 MAFAQ8NHW3 353 aaPredicted RBP3.23□□□□□ -1.89
NCK1-212ENST00000496489 SCAMP5Q8TAC9 235 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 CAGE1Q8TC20 777 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 SLC22A17Q8WUG5 538 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 TBC1D5Q92609 795 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 C3orf49Q96BT1 292 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 TBC1D20Q96BZ9 403 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 MCRS1Q96EZ8 462 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 PRR11Q96HE9 360 aaPredicted RBP3.23□□□□□ -1.89
NCK1-212ENST00000496489 HS6ST2Q96MM7 605 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 UROC1Q96N76 676 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 ISCA1Q9BUE6 129 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 CINPQ9BW66 212 aaPredicted RBP3.23□□□□□ -1.89
NCK1-212ENST00000496489 BRD8Q9H0E9 1235 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 KLK15Q9H2R5 256 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 PABPC3Q9H361 631 aaKnown RBP3.23□□□□□ -1.89
NCK1-212ENST00000496489 ELAC1Q9H777 363 aaKnown RBP3.23□□□□□ -1.89
NCK1-212ENST00000496489 SAP30LQ9HAJ7 183 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 PRDM16Q9HAZ2 1276 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 ITM2CQ9NQX7 267 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 SH3BP4Q9P0V3 963 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 SLC17A6Q9P2U8 582 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 DAPP1Q9UN19 280 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 VPS4AQ9UN37 437 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 PCDHB7Q9Y5E2 793 aa3.23□□□□□ -1.89
NCK1-212ENST00000496489 CCDC187A0A096LP49 1063 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 SMIM22K7EJ46 135 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 M0QYT0 321 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 ZNF213O14771 459 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 NPHP1O15259 732 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 CTIFO43310 598 aaKnown RBP3.22□□□□□ -1.89
NCK1-212ENST00000496489 TMIGD3P0DMS9 266 aaPredicted RBP3.22□□□□□ -1.89
NCK1-212ENST00000496489 PROZP22891 400 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 GALNSP34059 522 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 CACNA2D1P54289 1103 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 PRKAA2P54646 552 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 GPC5P78333 572 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 CCDC15Q0P6D6 951 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 CBFBQ13951 182 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 KCNJ12Q14500 433 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 TANGO2Q6ICL3 276 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 CEP85Q6P2H3 762 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 NFRKBQ6P4R8 1299 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 OLFML1Q6UWY5 402 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 SERPINA13PQ6UXR4 307 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 TRIM72Q6ZMU5 477 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 SYNE3Q6ZMZ3 975 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 TRABD2AQ86V40 505 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms