RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 PPP6R3Q5H9R7 873 aaPredicted RBP8.97□□□□□ -0.97
U2AF1-212ENST00000496462 TMCO4Q5TGY1 634 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 LRRTM3Q86VH5 581 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 CMTM8Q8IZV2 173 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 LZTR1Q8N653 840 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 FAM172AQ8WUF8 416 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 TTLL2Q9BWV7 592 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 CSNK1G1Q9HCP0 422 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 DEC1Q9P2X7 70 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 HMGXB4Q9UGU5 601 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 SLC25A13Q9UJS0 675 aa8.97□□□□□ -0.97
U2AF1-212ENST00000496462 CHD9Q3L8U1 2897 aa8.96□□□□□ -0.97
U2AF1-212ENST00000496462 CCDC66A2RUB6 948 aa8.96□□□□□ -0.97
U2AF1-212ENST00000496462 CTAGE9A4FU28 777 aa8.96□□□□□ -0.97
U2AF1-212ENST00000496462 EEF2KO00418 725 aaKnown RBP8.96□□□□□ -0.97
U2AF1-212ENST00000496462 CREB3O43889 395 aa8.96□□□□□ -0.97
U2AF1-212ENST00000496462 TADA3O75528 432 aa8.96□□□□□ -0.97
U2AF1-212ENST00000496462 ZRANB2O95218 330 aaKnown RBP eCLIP8.96□□□□□ -0.97
U2AF1-212ENST00000496462 GDI1P31150 447 aa8.96□□□□□ -0.97
U2AF1-212ENST00000496462 PDK2Q15119 407 aa8.96□□□□□ -0.97
U2AF1-212ENST00000496462 SLC25A52Q3SY17 297 aa8.96□□□□□ -0.97
U2AF1-212ENST00000496462 PMF1Q6P1K2 205 aa8.96□□□□□ -0.97
U2AF1-212ENST00000496462 KLHDC10Q6PID8 442 aa8.96□□□□□ -0.97
U2AF1-212ENST00000496462 TTC30AQ86WT1 665 aa8.96□□□□□ -0.97
U2AF1-212ENST00000496462 WFIKKN2Q8TEU8 576 aa8.96□□□□□ -0.97
U2AF1-212ENST00000496462 MYRFLQ96LU7 910 aa8.96□□□□□ -0.97
U2AF1-212ENST00000496462 SPON2Q9BUD6 331 aa8.96□□□□□ -0.97
U2AF1-212ENST00000496462 MUC3BQ9H195 1237 aa8.96□□□□□ -0.97
U2AF1-212ENST00000496462 DYRK4Q9NR20 520 aa8.96□□□□□ -0.97
U2AF1-212ENST00000496462 HOMER3Q9NSC5 361 aa8.96□□□□□ -0.97
U2AF1-212ENST00000496462 VCANP13611 3396 aa8.96□□□□□ -0.97
U2AF1-212ENST00000496462 A0A0A6YYK5 440 aaPredicted RBP8.96□□□□□ -0.98
U2AF1-212ENST00000496462 ADAM12O43184 909 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 ATG13O75143 517 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 SEC24AO95486 1093 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 RRM1P23921 792 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 GRSF1Q12849 480 aaKnown RBP eCLIP8.96□□□□□ -0.98
U2AF1-212ENST00000496462 MTMR3Q13615 1198 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 TUBB2AQ13885 445 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 MTF1Q14872 753 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 ITPRIPL2Q3MIP1 535 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 GRAMD4Q6IC98 578 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 RETSATQ6NUM9 610 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 ARID3BQ8IVW6 561 aaPredicted RBP8.96□□□□□ -0.98
U2AF1-212ENST00000496462 SUGP1Q8IWZ8 645 aaKnown RBP8.96□□□□□ -0.98
U2AF1-212ENST00000496462 HSPH1Q92598 858 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 TBC1D31Q96DN5 1066 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 TUBB2BQ9BVA1 445 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 TRMT1Q9NXH9 659 aaKnown RBP8.96□□□□□ -0.98
U2AF1-212ENST00000496462 PCSK1NQ9UHG2 260 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 ARHGAP42A6NI28 874 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 SYNCRIPO60506 623 aaKnown RBP8.96□□□□□ -0.98
U2AF1-212ENST00000496462 CYP1A1P04798 512 aaPredicted RBP8.96□□□□□ -0.98
U2AF1-212ENST00000496462 PBX1P40424 430 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 ZNF143P52747 638 aaPredicted RBP8.96□□□□□ -0.98
U2AF1-212ENST00000496462 SULT2A1Q06520 285 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 ADGRD2Q7Z7M1 963 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 RNF168Q8IYW5 571 aaPredicted RBP8.96□□□□□ -0.98
U2AF1-212ENST00000496462 CCAR2Q8N163 923 aaKnown RBP8.96□□□□□ -0.98
U2AF1-212ENST00000496462 RYBPQ8N488 228 aaPredicted RBP8.96□□□□□ -0.98
U2AF1-212ENST00000496462 TC2NQ8N9U0 490 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 WHAMMQ8TF30 809 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 BBS2Q9BXC9 721 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 ARHGAP26Q9UNA1 814 aa8.96□□□□□ -0.98
U2AF1-212ENST00000496462 ARID2Q68CP9 1835 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 ZNF840PA6NDX5 716 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 SRGAP2O75044 1071 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 RHOCP08134 193 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 CDH5P33151 784 aaPredicted RBP8.95□□□□□ -0.98
U2AF1-212ENST00000496462 PTPN9P43378 593 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 KCNQ1P51787 676 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 MCCD1P59942 119 aaPredicted RBP8.95□□□□□ -0.98
U2AF1-212ENST00000496462 APBA1Q02410 837 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 PRPSAP1Q14558 356 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 ZNF569Q5MCW4 686 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 TXNDC8Q6A555 127 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 IRF2BP2Q7Z5L9 587 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 UBALD2Q8IYN6 164 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 KIAA1958Q8N8K9 716 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 GANCQ8TET4 914 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 FNIP1Q8TF40 1166 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 CXCL16Q9H2A7 254 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 SP110Q9HB58 689 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 EYSQ5T1H1 3165 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 UNC80Q8N2C7 3258 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 A0A087X0T9 212 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 TBC1D3BA6NDS4 549 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 FGF10O15520 208 aaPredicted RBP8.95□□□□□ -0.98
U2AF1-212ENST00000496462 B4GALT3O60512 393 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 FAM228BP0C875 321 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 CDH6P55285 790 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 LMNB2Q03252 620 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 PTPN20Q4JDL3 420 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 TJAP1Q5JTD0 557 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 DSG4Q86SJ6 1040 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 PSTKQ8IV42 348 aaKnown RBP8.95□□□□□ -0.98
U2AF1-212ENST00000496462 LGI2Q8N0V4 545 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 DQX1Q8TE96 717 aaKnown RBP8.95□□□□□ -0.98
U2AF1-212ENST00000496462 RETREG1Q9H6L5 497 aa8.95□□□□□ -0.98
U2AF1-212ENST00000496462 TMLHEQ9NVH6 421 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms