RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 SELENOSQ9BQE4 189 aa22■■□□□ 1.11
FGFR1-223ENST00000496296 PRDM5Q9NQX1 630 aaPredicted RBP22■■□□□ 1.11
FGFR1-223ENST00000496296 SF3B1O75533 1304 aaKnown RBP eCLIP21.99■■□□□ 1.11
FGFR1-223ENST00000496296 APOC4-APOC2K7ER74 178 aa21.99■■□□□ 1.11
FGFR1-223ENST00000496296 ALOX15BO15296 676 aa21.99■■□□□ 1.11
FGFR1-223ENST00000496296 CST8O60676 142 aa21.99■■□□□ 1.11
FGFR1-223ENST00000496296 TIMP1P01033 207 aa21.99■■□□□ 1.11
FGFR1-223ENST00000496296 APOC2P02655 101 aa21.99■■□□□ 1.11
FGFR1-223ENST00000496296 PTPN9P43378 593 aa21.99■■□□□ 1.11
FGFR1-223ENST00000496296 MRPS5P82675 430 aaKnown RBP21.99■■□□□ 1.11
FGFR1-223ENST00000496296 RASA2Q15283 850 aa21.99■■□□□ 1.11
FGFR1-223ENST00000496296 TRNP1Q6NT89 227 aa21.99■■□□□ 1.11
FGFR1-223ENST00000496296 PRUNE1Q86TP1 453 aa21.99■■□□□ 1.11
FGFR1-223ENST00000496296 SPATA2LQ8IUW3 424 aaPredicted RBP21.99■■□□□ 1.11
FGFR1-223ENST00000496296 TET1Q8NFU7 2136 aa21.99■■□□□ 1.11
FGFR1-223ENST00000496296 PPM1EQ8WY54 764 aa21.99■■□□□ 1.11
FGFR1-223ENST00000496296 ARHGEF2Q92974 986 aaKnown RBP21.99■■□□□ 1.11
FGFR1-223ENST00000496296 PPCSQ9HAB8 311 aa21.99■■□□□ 1.11
FGFR1-223ENST00000496296 CSNK1G1Q9HCP0 422 aa21.99■■□□□ 1.11
FGFR1-223ENST00000496296 INTS9Q9NV88 658 aaKnown RBP21.99■■□□□ 1.11
FGFR1-223ENST00000496296 PCSK1NQ9UHG2 260 aa21.99■■□□□ 1.11
FGFR1-223ENST00000496296 ABHD14A-ACY1A0A1B0GW23 586 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 PRPSAP2O60256 369 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 UPP2O95045 317 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 ZSCAN5DPP0CG00 497 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 SLC11A1P49279 550 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 ATP11AP98196 1134 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 CBLBQ13191 982 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 CDO1Q16878 200 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 C15orf59Q2T9L4 293 aaPredicted RBP21.98■■□□□ 1.11
FGFR1-223ENST00000496296 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.98■■□□□ 1.113e-8■□□□□ 8.8
FGFR1-223ENST00000496296 PRCCQ92733 491 aaPredicted RBP21.98■■□□□ 1.11
FGFR1-223ENST00000496296 FAM149B1Q96BN6 582 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 KCNK16Q96T55 309 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 DMAP1Q9NPF5 467 aaPredicted RBP21.98■■□□□ 1.11
FGFR1-223ENST00000496296 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.98■■□□□ 1.11
FGFR1-223ENST00000496296 CPP00450 1065 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 RAG1P15918 1043 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 PECAM1P16284 738 aaPredicted RBP21.98■■□□□ 1.11
FGFR1-223ENST00000496296 BDNFP23560 247 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 QPCTQ16769 361 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 SMTNL2Q2TAL5 461 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 FAM171A1Q5VUB5 890 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 LRRTM3Q86VH5 581 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 KCTD6Q8NC69 237 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 FAM172AQ8WUF8 416 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 PEBP4Q96S96 227 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 TMEM121Q9BTD3 319 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 NGRNQ9NPE2 291 aaKnown RBP21.98■■□□□ 1.11
FGFR1-223ENST00000496296 CNGB3Q9NQW8 809 aa21.98■■□□□ 1.11
FGFR1-223ENST00000496296 DNAJC17Q9NVM6 304 aaKnown RBP21.98■■□□□ 1.11
FGFR1-223ENST00000496296 ETS1P14921 441 aa21.97■■□□□ 1.11
FGFR1-223ENST00000496296 YWHAZP63104 245 aaKnown RBP21.97■■□□□ 1.11
FGFR1-223ENST00000496296 RAB41Q5JT25 222 aa21.97■■□□□ 1.11
FGFR1-223ENST00000496296 KCNT1Q5JUK3 1230 aa21.97■■□□□ 1.11
FGFR1-223ENST00000496296 VSTM1Q6UX27 236 aa21.97■■□□□ 1.11
FGFR1-223ENST00000496296 CEP57Q86XR8 500 aa21.97■■□□□ 1.11
FGFR1-223ENST00000496296 TMEM199Q8N511 208 aa21.97■■□□□ 1.11
FGFR1-223ENST00000496296 ZMIZ2Q8NF64 920 aa21.97■■□□□ 1.11
FGFR1-223ENST00000496296 TEKT4Q8WW24 435 aa21.97■■□□□ 1.11
FGFR1-223ENST00000496296 SEC16BQ96JE7 1060 aa21.97■■□□□ 1.11
FGFR1-223ENST00000496296 TMEM209Q96SK2 561 aa21.97■■□□□ 1.11
FGFR1-223ENST00000496296 TMLHEQ9NVH6 421 aa21.97■■□□□ 1.11
FGFR1-223ENST00000496296 ZNF487B1APH4 448 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 SGK1O00141 431 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 KIAA0355O15063 1070 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 EFCAB14O75071 495 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 DAB1O75553 588 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 AMHP03971 560 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 GALTP07902 379 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 MATKP42679 507 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 BCAR1P56945 870 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 ADCY1Q08828 1119 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 NR1H3Q13133 447 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 BOLA3Q53S33 107 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 VARS2Q5ST30 1063 aaKnown RBP21.96■■□□□ 1.11
FGFR1-223ENST00000496296 SH3PXD2AQ5TCZ1 1133 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 ZNF280DQ6N043 979 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 C9orf72Q96LT7 481 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 ZCWPW1Q9H0M4 648 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 PNPLA8Q9NP80 782 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 SAYSD1Q9NPB0 183 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.96■■□□□ 1.11
FGFR1-223ENST00000496296 KIAA0754O94854 1291 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 CD48P09326 243 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 ALDH7A1P49419 539 aaKnown RBP21.96■■□□□ 1.11
FGFR1-223ENST00000496296 NFE2Q16621 373 aaPredicted RBP21.96■■□□□ 1.11
FGFR1-223ENST00000496296 CTXN3Q4LDR2 81 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 SLC39A12Q504Y0 691 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 GKAP1Q5VSY0 366 aaPredicted RBP21.96■■□□□ 1.11
FGFR1-223ENST00000496296 SCYL2Q6P3W7 929 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 FUT10Q6P4F1 479 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 CENPUQ71F23 418 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 PPIL6Q8IXY8 311 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 HAUS1Q96CS2 278 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 TBCBQ99426 244 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 MARCH5Q9NX47 278 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 FETUBQ9UGM5 382 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 STAP1Q9ULZ2 295 aa21.96■■□□□ 1.11
FGFR1-223ENST00000496296 MICAL3Q7RTP6 2002 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms