RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 GRIA2P42262 883 aa21.57■■□□□ 1.04
COL9A2-211ENST00000496215 PTK2Q05397 1052 aa21.57■■□□□ 1.04
COL9A2-211ENST00000496215 SRSF5Q13243 272 aaKnown RBP21.57■■□□□ 1.04
COL9A2-211ENST00000496215 RAPGEF1Q13905 1077 aa21.57■■□□□ 1.04
COL9A2-211ENST00000496215 KRT31Q15323 416 aa21.57■■□□□ 1.04
COL9A2-211ENST00000496215 HEATR6Q6AI08 1181 aaKnown RBP21.57■■□□□ 1.04
COL9A2-211ENST00000496215 LONP2Q86WA8 852 aa21.57■■□□□ 1.04
COL9A2-211ENST00000496215 DCLK2Q8N568 766 aa21.57■■□□□ 1.04
COL9A2-211ENST00000496215 STK32AQ8WU08 396 aa21.57■■□□□ 1.04
COL9A2-211ENST00000496215 XPO6Q96QU8 1125 aaKnown RBP21.57■■□□□ 1.04
COL9A2-211ENST00000496215 FANCLQ9NW38 375 aa21.57■■□□□ 1.04
COL9A2-211ENST00000496215 WDR35Q9P2L0 1181 aa21.57■■□□□ 1.04
COL9A2-211ENST00000496215 DEC1Q9P2X7 70 aa21.57■■□□□ 1.04
COL9A2-211ENST00000496215 HBS1LQ9Y450 684 aaKnown RBP21.57■■□□□ 1.04
COL9A2-211ENST00000496215 FHOD1Q9Y613 1164 aa21.57■■□□□ 1.04
COL9A2-211ENST00000496215 CACNG3O60359 315 aa21.56■■□□□ 1.04
COL9A2-211ENST00000496215 KLKB1P03952 638 aa21.56■■□□□ 1.04
COL9A2-211ENST00000496215 PNMA6AP0CW24 399 aaPredicted RBP21.56■■□□□ 1.04
COL9A2-211ENST00000496215 TYRP14679 529 aa21.56■■□□□ 1.04
COL9A2-211ENST00000496215 HOXA6P31267 233 aa21.56■■□□□ 1.04
COL9A2-211ENST00000496215 RPL34P49207 117 aaKnown RBP21.56■■□□□ 1.04
COL9A2-211ENST00000496215 TYRO3Q06418 890 aa21.56■■□□□ 1.04
COL9A2-211ENST00000496215 PDCLQ13371 301 aa21.56■■□□□ 1.04
COL9A2-211ENST00000496215 C2orf27AQ580R0 203 aa21.56■■□□□ 1.04
COL9A2-211ENST00000496215 GRAMD4Q6IC98 578 aa21.56■■□□□ 1.04
COL9A2-211ENST00000496215 MSANTD2Q6P1R3 559 aa21.56■■□□□ 1.04
COL9A2-211ENST00000496215 SYT13Q7L8C5 426 aa21.56■■□□□ 1.04
COL9A2-211ENST00000496215 PHTF2Q8N3S3 785 aa21.56■■□□□ 1.04
COL9A2-211ENST00000496215 ANKRD20A12PQ8NF67 263 aa21.56■■□□□ 1.04
COL9A2-211ENST00000496215 USP33Q8TEY7 942 aa21.56■■□□□ 1.04
COL9A2-211ENST00000496215 P2RY11Q96G91 374 aa21.56■■□□□ 1.04
COL9A2-211ENST00000496215 VPS16Q9H269 839 aa21.56■■□□□ 1.04
COL9A2-211ENST00000496215 DNAJC17Q9NVM6 304 aaKnown RBP21.56■■□□□ 1.04
COL9A2-211ENST00000496215 SFMBT1Q9UHJ3 866 aa21.56■■□□□ 1.04
COL9A2-211ENST00000496215 AGO1Q9UL18 857 aaKnown RBP21.56■■□□□ 1.04
COL9A2-211ENST00000496215 SMG5Q9UPR3 1016 aaKnown RBP21.56■■□□□ 1.04
COL9A2-211ENST00000496215 E5RJQ4 531 aa21.55■■□□□ 1.04
COL9A2-211ENST00000496215 MSI1O43347 362 aaKnown RBP21.55■■□□□ 1.04
COL9A2-211ENST00000496215 HRO43593 1189 aa21.55■■□□□ 1.04
COL9A2-211ENST00000496215 CHKAP35790 457 aa21.55■■□□□ 1.04
COL9A2-211ENST00000496215 PXNP49023 591 aaPredicted RBP21.55■■□□□ 1.04
COL9A2-211ENST00000496215 HARS2P49590 506 aaKnown RBP21.55■■□□□ 1.04
COL9A2-211ENST00000496215 KCNMA1Q12791 1236 aa21.55■■□□□ 1.04
COL9A2-211ENST00000496215 DMC1Q14565 340 aa21.55■■□□□ 1.04
COL9A2-211ENST00000496215 TRIP4Q15650 581 aaPredicted RBP21.55■■□□□ 1.04
COL9A2-211ENST00000496215 FKBP15Q5T1M5 1219 aa21.55■■□□□ 1.04
COL9A2-211ENST00000496215 KLHDC7AQ5VTJ3 777 aa21.55■■□□□ 1.04
COL9A2-211ENST00000496215 DPY19L2P1Q6NXN4 242 aa21.55■■□□□ 1.04
COL9A2-211ENST00000496215 CAVIN1Q6NZI2 390 aaKnown RBP21.55■■□□□ 1.04
COL9A2-211ENST00000496215 DENND1CQ8IV53 801 aa21.55■■□□□ 1.04
COL9A2-211ENST00000496215 PASD1Q8IV76 773 aa21.55■■□□□ 1.04
COL9A2-211ENST00000496215 TERB1Q8NA31 727 aa21.55■■□□□ 1.04
COL9A2-211ENST00000496215 BHMTQ93088 406 aa21.55■■□□□ 1.04
COL9A2-211ENST00000496215 FAM149B1Q96BN6 582 aa21.55■■□□□ 1.04
COL9A2-211ENST00000496215 HHIPQ96QV1 700 aa21.55■■□□□ 1.04
COL9A2-211ENST00000496215 TRIM62Q9BVG3 475 aa21.55■■□□□ 1.04
COL9A2-211ENST00000496215 SLC4A5Q9BY07 1137 aa21.55■■□□□ 1.04
COL9A2-211ENST00000496215 CYTH4Q9UIA0 394 aa21.55■■□□□ 1.04
COL9A2-211ENST00000496215 PCDHGC3Q9UN70 934 aa21.55■■□□□ 1.04
COL9A2-211ENST00000496215 FOXN3O00409 490 aaPredicted RBP21.54■■□□□ 1.04
COL9A2-211ENST00000496215 UCHL3P15374 230 aa21.54■■□□□ 1.04
COL9A2-211ENST00000496215 MRPS21P82921 87 aaKnown RBP21.54■■□□□ 1.04
COL9A2-211ENST00000496215 C10orf76Q5T2E6 689 aa21.54■■□□□ 1.04
COL9A2-211ENST00000496215 NUDT18Q6ZVK8 323 aa21.54■■□□□ 1.04
COL9A2-211ENST00000496215 WDR5BQ86VZ2 330 aa21.54■■□□□ 1.04
COL9A2-211ENST00000496215 SCUBE3Q8IX30 993 aa21.54■■□□□ 1.04
COL9A2-211ENST00000496215 FAM71AQ8IYT1 594 aa21.54■■□□□ 1.04
COL9A2-211ENST00000496215 CAMKK1Q8N5S9 505 aa21.54■■□□□ 1.04
COL9A2-211ENST00000496215 HINFPQ9BQA5 517 aa21.54■■□□□ 1.04
COL9A2-211ENST00000496215 NAT10Q9H0A0 1025 aaKnown RBP21.54■■□□□ 1.04
COL9A2-211ENST00000496215 MMP17Q9ULZ9 603 aa21.54■■□□□ 1.04
COL9A2-211ENST00000496215 TBC1D3BA6NDS4 549 aa21.53■■□□□ 1.04
COL9A2-211ENST00000496215 TRIM24O15164 1050 aa21.53■■□□□ 1.04
COL9A2-211ENST00000496215 CYBBP04839 570 aa21.53■■□□□ 1.04
COL9A2-211ENST00000496215 NCAM1P13591 858 aa21.53■■□□□ 1.04
COL9A2-211ENST00000496215 CLCN1P35523 988 aa21.53■■□□□ 1.04
COL9A2-211ENST00000496215 KRT9P35527 623 aa21.53■■□□□ 1.04
COL9A2-211ENST00000496215 TNFRSF4P43489 277 aa21.53■■□□□ 1.04
COL9A2-211ENST00000496215 BPIFB4P59827 614 aa21.53■■□□□ 1.04
COL9A2-211ENST00000496215 DRAP1Q14919 205 aaPredicted RBP21.53■■□□□ 1.04
COL9A2-211ENST00000496215 SLC47A2Q86VL8 602 aa21.53■■□□□ 1.04
COL9A2-211ENST00000496215 CPXM2Q8N436 756 aa21.53■■□□□ 1.04
COL9A2-211ENST00000496215 AOPEPQ8N6M6 819 aa21.53■■□□□ 1.04
COL9A2-211ENST00000496215 NOX5Q96PH1 765 aa21.53■■□□□ 1.04
COL9A2-211ENST00000496215 PLCB1Q9NQ66 1216 aa21.53■■□□□ 1.04
COL9A2-211ENST00000496215 CEP83Q9Y592 693 aa21.53■■□□□ 1.04
COL9A2-211ENST00000496215 DNAH14Q0VDD8 3507 aa21.52■■□□□ 1.04
COL9A2-211ENST00000496215 A0A0A0MRY4 1105 aa21.52■■□□□ 1.04
COL9A2-211ENST00000496215 PAPSS1O43252 624 aaPredicted RBP21.52■■□□□ 1.04
COL9A2-211ENST00000496215 APBB3O95704 486 aa21.52■■□□□ 1.04
COL9A2-211ENST00000496215 LATS1O95835 1130 aa21.52■■□□□ 1.04
COL9A2-211ENST00000496215 PENKP01210 267 aaPredicted RBP21.52■■□□□ 1.04
COL9A2-211ENST00000496215 CNR2P34972 360 aa21.52■■□□□ 1.04
COL9A2-211ENST00000496215 TIE1P35590 1138 aa21.52■■□□□ 1.04
COL9A2-211ENST00000496215 DGKGP49619 791 aa21.52■■□□□ 1.04
COL9A2-211ENST00000496215 COPB1P53618 953 aaKnown RBP21.52■■□□□ 1.04
COL9A2-211ENST00000496215 LPAL2Q16609 132 aa21.52■■□□□ 1.04
COL9A2-211ENST00000496215 HSF5Q4G112 596 aaPredicted RBP21.52■■□□□ 1.04
COL9A2-211ENST00000496215 TMEM110Q86TL2 294 aa21.52■■□□□ 1.04
COL9A2-211ENST00000496215 FAM217AQ8IXS0 508 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms